PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1pk8a2

Fold library id	Fold	Superfamily	Family
d1pk8a2	ATP-grasp	Glutathione synthetase ATP-binding domain-like	Synapsin C-terminal domain

Links to external resources
Added to library: Tue Mar 16 12:55:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N S L H S V Y N F C D K P W V F A Q M V R L H K K L G T E E F P L I D Q T F Y P N H K E M L S S T T Y P V V V K M G H A H S G M G K V K V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S
T T T S
B
S S G G G
S S S S S S
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N Q H D F Q D I A S V V A L T K T Y A T A E P F I D A K Y D V R V Q K I G Q N Y K A Y M R T S V S G N W K T N T G S A M L E Q I A M S D R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T S
T T S S S
S S T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence K L W V D T C S E I F G G L D I C A V E A L H G K D G R D H I I E V V G S S M P L I G D H Q D E D K Q L I V E L V V N K M T Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T G G G
S T T S
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	S	L	H	S	V	Y	N	F	C	D	K	P	W	V	F	A	Q	M	V	R	L	H	K	K	L	G	T	E	E	F	P	L	I	D	Q	T	F	Y	P	N	H	K	E	M	L	S	S	T	T	Y	P	V	V	V	K	M	G	H	A	H	S	G	M	G	K	V	K	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S	S																	T	T	T	S		B							S	S	G	G	G					S	S	S	S						S	S			T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	Q	H	D	F	Q	D	I	A	S	V	V	A	L	T	K	T	Y	A	T	A	E	P	F	I	D	A	K	Y	D	V	R	V	Q	K	I	G	Q	N	Y	K	A	Y	M	R	T	S	V	S	G	N	W	K	T	N	T	G	S	A	M	L	E	Q	I	A	M	S	D	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	S																				T	T										S	S	S		S	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	K	L	W	V	D	T	C	S	E	I	F	G	G	L	D	I	C	A	V	E	A	L	H	G	K	D	G	R	D	H	I	I	E	V	V	G	S	S	M	P	L	I	G	D	H	Q	D	E	D	K	Q	L	I	V	E	L	V	V	N	K	M	T	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	G	G	G			S										T	T	S										T	T					T	T