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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3h1tA_

Fold library idPDB HeaderMoleculeTitle
c3h1tA_PDB header: hydrolaseChain: A: PDB Molecule: type i site-specific restriction-modificationPDBTitle: the fragment structure of a putative hsdr subunit of a type2 i restriction enzyme from vibrio vulnificus yj016


Added to library: Sat Aug 28 22:27:22 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SXALNEADTCRVYVTPKLKESGWENNPSAITEQYTFTDGRVQFKGSKVQRGEQKRADYLLKYTRDFPIAV
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Known secondary structure (DSSP)

S

TTTTTSTT





TT



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VEAKPENSPVGQGXQQAKDYAEILGLKFAYSTNGHEILEFDYTTGEEQLLSRFPTPDELFKRLCGDEGIK
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Known secondary structure (DSSP)

TTS
GGGST
S
SS
TTT

SS


T

 .........150.........160.........170.........180.........190.........200.........210
Sequence DEDLDTLLSPYHHVPRYYQQIAINRAVQSVLQGKKRSLITXATGTGKTVVAFQISWKLWSARWNRTGDYR
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Known secondary structure (DSSP) GGGT







TT
S
TTS
TT

SS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KPRILFLADTFTPFGDARHKIEGVVKSREIYFAIYQSIPGLYKEFPQDFFDLIIIDECHWREILEYFEPA
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Known secondary structure (DSSP)





TTT
SS




SS
SGGG


GGGGS
TTS
SS



STTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FQIGXTATPLREDNRDTYRYFGNPIYTYSLRQGIDDGFLAPYRVHRVISEVDATKDFERVIALKARTDAF
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Known secondary structure (DSSP) SS
S
TTTS
S
S
TSS

TT



ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence AKHLTDFXKRTDRFAKTIVFCVDQEHADEXRRALNNLNSDLSRKHPDYVARVTSEEGKIGKGHLSRFQEL
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Known secondary structure (DSSP)
TTSSSTTT
TTS
SSTT
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence ETSTPVILTTSQLLTTGVDAPTCKNVVLARVVNSXSEFKQIVGRGTRLREDYGKLWFNIIDYTGSATQNF
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Known secondary structure (DSSP) T




SSTTTTT


TTS



TTS


BGGGTBS

SSST
 .........500.........510.....
Sequence ADPDFDGYPEIEDEVVIDEDGEEVV
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Known secondary structure (DSSP)




S
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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