Fold library entry viewer: c1upsB_

Added to library: Tue Mar 16 12:53:35 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	F	P	A	N	P	I	E	K	A	G	Y	K	L	D	F	S	D	E	F	N	G	P	T	L	D	R	E	K	W	T	D	Y	Y	L	P	H	W	C	K	D	P	E	S	A	K	A	N	Y	R	F	E	N	G	S	L	V	E	Y	I	T	E	D	Q	K	P	W	C	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S		T	T												S	S			T	T	T		B		B	S	S	G	G	G		S	S	G	G	G	G	B							T	T								T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	D	G	T	V	R	S	S	A	I	M	S	F	D	K	S	W	I	H	N	F	S	G	T	T	D	N	H	E	R	N	E	W	R	G	Y	T	T	K	Y	G	Y	F	E	I	R	A	K	L	S	N	T	G	G	G	G	H	Q	A	W	W	M	V	G	M	Q	D	D	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								S				T	T				T	T			S										S	S		B	S	S														S	S												T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	W	F	N	S	K	Q	T	G	E	I	D	I	L	E	T	F	F	S	K	K	D	T	W	R	I	A	A	Y	G	W	N	D	P	N	F	Q	T	S	W	T	I	S	E	D	K	V	P	S	G	D	P	T	S	E	Y	H	I	Y	A	M	E	W	T	P	T	A	L	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T		S											B	T	T		T	T									T	T		T	T	S		S	S									S	S	S		T	T	T	S										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	Y	D	N	E	L	F	K	V	I	Y	G	S	P	D	Y	E	M	G	T	I	L	N	I	Y	T	D	A	G	S	G	A	H	N	D	V	W	P	K	E	W	A	I	D	Y	M	R	V	W	K	P	V	D	G	Y	K	N	N	Y	L	I	R	N	R	Q	T	G	K	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												S											S	B	T	T	B				S																	T	T											T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	I	E	E	N	N	D	K	V	S	Y	G	D	I	T	L	K	N	E	K	N	A	K	W	S	K	E	Y	R	D	G	Y	T	L	L	K	N	N	E	T	G	E	Y	L	N	I	E	N	Q	T	G	Y	I	E	H	G	K	V	P	K	T	W	W	S	A	Q	W	S	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S	S								T	T	T	T	G	G	G								T	T							T	T	T							T	T			S	B								T	T		G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Sequence	P	V	D	G	Y	T	R	F	V	N	R	W	K	P	N	M	S	I	H	T	E	S	Y	E	G	V	L	Q	Y	G	N	V	P	N	T	Y	W	T	S	Q	W	Q	L	I	P	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T							S	S	S	T	T						T	T			S	B								T	T		G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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