Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP76291
DateThu Jan 5 12:21:36 GMT 2012
Unique Job ID89c1bdf93c541bad

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template d2o57a1
Top template information
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
Confidence and coverage
Confidence:100.0% Coverage: 72%
231 residues ( 72% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLL
Secondary structure 
















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Disorder  ????


























?????























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   .........70.........80.........90.........100.........110.........120
Sequence  HSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSD
Secondary structure 























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Disorder 



?????
????














??




























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   .........130.........140.........150.........160.........170.........180
Sequence  LTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG
Secondary structure 





















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?











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   .........190.........200.........210.........220.........230.........240
Sequence  IEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPG
Secondary structure 
























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   .........250.........260.........270.........280.........290.........300
Sequence  DRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDP
Secondary structure 


























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Disorder 



































??
?



















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   .........310.........320...
Sequence  HDPGKTVEGYPAPKRAVLIARKP
Secondary structure 











SS confidence 






















Disorder 




??












???
Disorder confidence 






















 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2o57 chain A domain 1

3D model

Region: 91 - 323
Aligned: 231
Modelled: 232
Confidence: 100.0%
Identity: 13%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Mycolic acid cyclopropane synthase

Phyre2

PDB 1vl5 chain A

3D model

Region: 111 - 323
Aligned: 211
Modelled: 213
Confidence: 100.0%
Identity: 15%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: UbiE/COQ5-like

Phyre2

PDB 1vl5 chain B

3D model

Region: 111 - 323
Aligned: 211
Modelled: 213
Confidence: 100.0%
Identity: 15%
PDB header:transferase
Chain: B: PDB Molecule:unknown conserved protein bh2331;
PDBTitle: crystal structure of a putative methyltransferase (bh2331) from2 bacillus halodurans c-125 at 1.95 a resolution

Phyre2

PDB 3bus chain B

3D model

Region: 107 - 323
Aligned: 217
Modelled: 217
Confidence: 100.0%
Identity: 19%
PDB header:transferase
Chain: B: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of rebm

Phyre2

PDB 1nkv chain A

3D model

Region: 107 - 296
Aligned: 188
Modelled: 190
Confidence: 100.0%
Identity: 16%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Hypothetical Protein YjhP

Phyre2

PDB 3g5l chain A

3D model

Region: 107 - 323
Aligned: 195
Modelled: 198
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:putative s-adenosylmethionine dependent
PDBTitle: crystal structure of putative s-adenosylmethionine2 dependent methyltransferase from listeria monocytogenes

Phyre2

PDB 1kpi chain A

3D model

Region: 107 - 278
Aligned: 170
Modelled: 172
Confidence: 100.0%
Identity: 19%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Mycolic acid cyclopropane synthase

Phyre2

PDB 2fk8 chain A

3D model

Region: 107 - 275
Aligned: 167
Modelled: 169
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:methoxy mycolic acid synthase 4;
PDBTitle: crystal structure of hma (mmaa4) from mycobacterium tuberculosis2 complexed with s-adenosylmethionine

Phyre2

PDB 1l1e chain A

3D model

Region: 107 - 275
Aligned: 167
Modelled: 168
Confidence: 100.0%
Identity: 21%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Mycolic acid cyclopropane synthase

Phyre2

PDB 3e7p chain A

3D model

Region: 94 - 283
Aligned: 186
Modelled: 190
Confidence: 99.9%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of of putative methyltransferase from bacteroides2 vulgatus atcc 8482

Phyre2

PDB 2fk8 chain A domain 1

3D model

Region: 107 - 274
Aligned: 166
Modelled: 168
Confidence: 99.9%
Identity: 18%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Mycolic acid cyclopropane synthase

Phyre2

PDB 1kpg chain A

3D model

Region: 107 - 275
Aligned: 167
Modelled: 169
Confidence: 99.9%
Identity: 21%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Mycolic acid cyclopropane synthase

Phyre2

PDB 1tpy chain A

3D model

Region: 107 - 275
Aligned: 167
Modelled: 169
Confidence: 99.9%
Identity: 22%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Mycolic acid cyclopropane synthase

Phyre2

PDB 3bkx chain B

3D model

Region: 92 - 271
Aligned: 180
Modelled: 180
Confidence: 99.9%
Identity: 14%
PDB header:transferase
Chain: B: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution

Phyre2

PDB 3bkw chain B

3D model

Region: 111 - 322
Aligned: 191
Modelled: 194
Confidence: 99.9%
Identity: 20%
PDB header:transferase
Chain: B: PDB Molecule:s-adenosylmethionine dependent methyltransferase;
PDBTitle: crystal structure of s-adenosylmethionine dependent methyltransferase2 (np_104914.1) from mesorhizobium loti at 1.60 a resolution

Phyre2

PDB 1jqe chain A

3D model

Region: 103 - 298
Aligned: 196
Modelled: 196
Confidence: 99.9%
Identity: 11%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Histamine methyltransferase

Phyre2

PDB 3cc8 chain A

3D model

Region: 114 - 323
Aligned: 198
Modelled: 205
Confidence: 99.9%
Identity: 16%
PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of a putative methyltransferase (bce_1332) from2 bacillus cereus atcc 10987 at 1.64 a resolution

Phyre2

PDB 2gh1 chain A domain 1

3D model

Region: 102 - 297
Aligned: 194
Modelled: 196
Confidence: 99.9%
Identity: 15%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: BC2162-like

Phyre2

PDB 3e23 chain A

3D model

Region: 94 - 323
Aligned: 184
Modelled: 194
Confidence: 99.9%
Identity: 21%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein rpa2492;
PDBTitle: crystal structure of the rpa2492 protein in complex with2 sam from rhodopseudomonas palustris, northeast structural3 genomics consortium target rpr299

Phyre2

PDB 3f4k chain A

3D model

Region: 107 - 276
Aligned: 166
Modelled: 170
Confidence: 99.9%
Identity: 14%
PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of a probable methyltransferase from2 bacteroides thetaiotaomicron. northeast structural3 genomics target btr309.

Phyre2

PDB 1xdz chain A

3D model

Region: 58 - 224
Aligned: 162
Modelled: 162
Confidence: 99.7%
Identity: 16%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Glucose-inhibited division protein B (GidB)

Phyre2
1

d2o57a1
2

d1vl5a_
3

c1vl5B_
4

c3busB_
5

d1nkva_
6

c3g5lA_
7

d1kpia_
8

c2fk8A_
9

d1l1ea_
10

c3e7pA_
11

d2fk8a1
12

d1kpga_
13

d1tpya_
14

c3bkxB_
15

c3bkwB_
16

d1jqea_
17

c3cc8A_
18

d2gh1a1
19

c3e23A_
20

c3f4kA_
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d1xdza_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2o57a1



100.0 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
2d1vl5a_



100.0 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:UbiE/COQ5-like
3c1vl5B_



100.0 15 PDB header:transferase
Chain: B: PDB Molecule:unknown conserved protein bh2331;
PDBTitle: crystal structure of a putative methyltransferase (bh2331) from2 bacillus halodurans c-125 at 1.95 a resolution
4c3busB_



100.0 19 PDB header:transferase
Chain: B: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of rebm
5d1nkva_



100.0 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Hypothetical Protein YjhP
6c3g5lA_



100.0 18 PDB header:transferase
Chain: A: PDB Molecule:putative s-adenosylmethionine dependent
PDBTitle: crystal structure of putative s-adenosylmethionine2 dependent methyltransferase from listeria monocytogenes
7d1kpia_



100.0 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
8c2fk8A_



100.0 18 PDB header:transferase
Chain: A: PDB Molecule:methoxy mycolic acid synthase 4;
PDBTitle: crystal structure of hma (mmaa4) from mycobacterium tuberculosis2 complexed with s-adenosylmethionine
9d1l1ea_



100.0 21 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
10c3e7pA_



99.9 17 PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of of putative methyltransferase from bacteroides2 vulgatus atcc 8482
11d2fk8a1



99.9 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
12d1kpga_



99.9 21 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
13d1tpya_



99.9 22 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Mycolic acid cyclopropane synthase
14c3bkxB_



99.9 14 PDB header:transferase
Chain: B: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution
15c3bkwB_



99.9 20 PDB header:transferase
Chain: B: PDB Molecule:s-adenosylmethionine dependent methyltransferase;
PDBTitle: crystal structure of s-adenosylmethionine dependent methyltransferase2 (np_104914.1) from mesorhizobium loti at 1.60 a resolution
16d1jqea_



99.9 11 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Histamine methyltransferase
17c3cc8A_



99.9 16 PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of a putative methyltransferase (bce_1332) from2 bacillus cereus atcc 10987 at 1.64 a resolution
18d2gh1a1



99.9 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:BC2162-like
19c3e23A_



99.9 21 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein rpa2492;
PDBTitle: crystal structure of the rpa2492 protein in complex with2 sam from rhodopseudomonas palustris, northeast structural3 genomics consortium target rpr299
20c3f4kA_



99.9 14 PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of a probable methyltransferase from2 bacteroides thetaiotaomicron. northeast structural3 genomics target btr309.
21c3ocjA_



not modelled 99.9 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis
22c3ccfB_



not modelled 99.9 20 PDB header:transferase
Chain: B: PDB Molecule:cyclopropane-fatty-acyl-phospholipid synthase;
PDBTitle: crystal structure of putative methyltransferase (yp_321342.1) from2 anabaena variabilis atcc 29413 at 1.90 a resolution
23d1xxla_



not modelled 99.9 10 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:UbiE/COQ5-like
24d2p7ia1



not modelled 99.9 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:UbiE/COQ5-like
25c2yr0A_



not modelled 99.9 10 PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein ttha0223;
PDBTitle: crystal structure of hypothetical methyltransferase ttha0223 from2 thermus thermophilus hb8
26c3lccA_



not modelled 99.9 15 PDB header:transferase
Chain: A: PDB Molecule:putative methyl chloride transferase;
PDBTitle: structure of a sam-dependent halide methyltransferase from arabidopsis2 thaliana
27c2p7iB_



not modelled 99.9 13 PDB header:transferase
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a sam dependent methyl-transferase type 12 family2 protein (eca1738) from pectobacterium atrosepticum scri1043 at 1.74 a3 resolution
28c3ujcA_



not modelled 99.9 15 PDB header:transferase
Chain: A: PDB Molecule:phosphoethanolamine n-methyltransferase;
PDBTitle: phosphoethanolamine methyltransferase mutant (h132a) from plasmodium2 falciparum in complex with phosphocholine
29c3dliB_



not modelled 99.9 18 PDB header:transferase
Chain: B: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of a sam dependent methyltransferase from2 archaeoglobus fulgidus
30d2ex4a1



not modelled 99.9 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:AD-003 protein-like
31c3mggB_



not modelled 99.9 16 PDB header:transferase
Chain: B: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of methyl transferase from methanosarcina2 mazei
32c3dlcA_



not modelled 99.9 12 PDB header:transferase
Chain: A: PDB Molecule:putative s-adenosyl-l-methionine-dependent
PDBTitle: crystal structure of a putative s-adenosyl-l-methionine-dependent2 methyltransferase (mmp1179) from methanococcus maripaludis at 1.15 a3 resolution
33c3l8dA_



not modelled 99.9 17 PDB header:transferase
Chain: A: PDB Molecule:methyltransferase;
PDBTitle: crystal structure of methyltransferase from bacillus2 thuringiensis
34c3e8sA_



not modelled 99.9 21 PDB header:transferase
Chain: A: PDB Molecule:putative sam dependent methyltransferase;
PDBTitle: crystal structure of putative sam dependent methyltransferase in2 complex with sah (np_744700.1) from pseudomonas putida kt2440 at 2.103 a resolution
35c3bgvC_



not modelled 99.9 16 PDB header:transferase
Chain: C: PDB Molecule:mrna cap guanine-n7 methyltransferase;
PDBTitle: crystal structure of mrna cap guanine-n7 methyltransferase2 in complex with sah
36d1r74a_



not modelled 99.9 17 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Glycine N-methyltransferase
37c1z3cA_



not modelled 99.9 16 PDB header:transferase
Chain: A: PDB Molecule:mrna capping enzyme;
PDBTitle: encephalitozooan cuniculi mrna cap (guanine-n7)2 methyltransferasein complexed with azoadomet
38d1ri5a_



not modelled 99.9 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:mRNA cap (Guanine N-7) methyltransferase
39c3g2qA_



not modelled 99.9 14 PDB header:transferase
Chain: A: PDB Molecule:pcza361.24;
PDBTitle: crystal structure of the glycopeptide n-methyltransferase mtfa2 complexed with sinefungin
40d1im8a_



not modelled 99.9 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Hypothetical protein HI0319 (YecO)
41c3h2bB_



not modelled 99.9 16 PDB header:transferase
Chain: B: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of the sam-dependent methyltransferase2 cg3271 from corynebacterium glutamicum in complex with s-3 adenosyl-l-homocysteine and pyrophosphate. northeast4 structural genomics consortium target cgr113a
42d1xtpa_



not modelled 99.9 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:AD-003 protein-like
43c3ou7A_



not modelled 99.9 13 PDB header:transferase
Chain: A: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: dhpi-sam-hep complex
44d2a14a1



not modelled 99.9 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Arylamine N-methyltransferase
45d1xvaa_



not modelled 99.9 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Glycine N-methyltransferase
46c2p35A_



not modelled 99.9 16 PDB header:transferase
Chain: A: PDB Molecule:trans-aconitate 2-methyltransferase;
PDBTitle: crystal structure of trans-aconitate methyltransferase from2 agrobacterium tumefaciens
47c2gs9A_



not modelled 99.9 19 PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein tt1324;
PDBTitle: crystal structure of tt1324 from thermus thermophilis hb8
48d1y8ca_



not modelled 99.9 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:CAC2371-like
49c3g5tA_



not modelled 99.9 12 PDB header:transferase
Chain: A: PDB Molecule:trans-aconitate 3-methyltransferase;
PDBTitle: crystal structure of trans-aconitate 3-methyltransferase2 from yeast
50c3ndjA_



not modelled 99.9 14 PDB header:transferase
Chain: A: PDB Molecule:methyltransferase;
PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product
51d1vlma_



not modelled 99.9 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:UbiE/COQ5-like
52c3m70A_



not modelled 99.9 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:tellurite resistance protein tehb homolog;
PDBTitle: crystal structure of tehb from haemophilus influenzae
53c3ofkA_



not modelled 99.9 17 PDB header:transferase
Chain: A: PDB Molecule:nodulation protein s;
PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah)
54d1xcla_



not modelled 99.9 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Guanidinoacetate methyltransferase
55c3dh0B_



not modelled 99.9 18 PDB header:transferase
Chain: B: PDB Molecule:sam dependent methyltransferase;
PDBTitle: crystal structure of a sam dependent methyltransferase from2 aquifex aeolicus
56c3egeA_



not modelled 99.9 14 PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase from antibiotic biosynthesis
PDBTitle: crystal structure of putative methyltransferase from antibiotic2 biosynthesis pathway (yp_324569.1) from anabaena variabilis atcc3 29413 at 2.40 a resolution
57d1wzna1



not modelled 99.9 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:CAC2371-like
58c3opnA_



not modelled 99.9 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative hemolysin;
PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis
59c3dtnA_



not modelled 99.9 17 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative methyltransferase mm_2633;
PDBTitle: crystal structure of putative methyltransferase-mm_26332 from methanosarcina mazei .
60c3hnrA_



not modelled 99.9 13 PDB header:transferase
Chain: A: PDB Molecule:probable methyltransferase bt9727_4108;
PDBTitle: crystal structure of a probable methyltransferase2 bt9727_4108 from bacillus thuringiensis subsp. northeast3 structural genomics consortium target id bur219
61c3sm3A_



not modelled 99.9 19 PDB header:transferase
Chain: A: PDB Molecule:sam-dependent methyltransferases;
PDBTitle: crystal structure of sam-dependent methyltransferases q8puk2_metma2 from methanosarcina mazei. northeast structural genomics consortium3 target mar262.
62d1ve3a1



not modelled 99.9 17 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:CAC2371-like
63c1yb2A_



not modelled 99.9 17 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ta0852;
PDBTitle: structure of a putative methyltransferase from thermoplasma2 acidophilum.
64d1yb2a1



not modelled 99.9 17 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:tRNA(1-methyladenosine) methyltransferase-like
65c3mq2A_



not modelled 99.9 15 PDB header:transferase
Chain: A: PDB Molecule:16s rrna methyltransferase;
PDBTitle: crystal structure of 16s rrna methyltranferase kamb
66d1zx0a1



not modelled 99.9 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Guanidinoacetate methyltransferase
67c3jwgA_



not modelled 99.9 16 PDB header:transferase
Chain: A: PDB Molecule:methyltransferase type 12;
PDBTitle: crystal structure analysis of the methyltransferase domain2 of bacterial-cthen1-c
68c3g07C_



not modelled 99.9 16 PDB header:transferase
Chain: C: PDB Molecule:7sk snrna methylphosphate capping enzyme;
PDBTitle: methyltransferase domain of human bicoid-interacting protein2 3 homolog (drosophila)
69c3merA_



not modelled 99.9 12 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:slr1183 protein;
PDBTitle: crystal structure of the methyltransferase slr1183 from2 synechocystis sp. pcc 6803, northeast structural genomics3 consortium target sgr145
70c2iipD_



not modelled 99.9 16 PDB header:transferase
Chain: D: PDB Molecule:nicotinamide n-methyltransferase;
PDBTitle: human nicotinamide n-methyltransferase
71d1d2ha_



not modelled 99.9 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Glycine N-methyltransferase
72c3gwzB_



not modelled 99.9 15 PDB header:transferase
Chain: B: PDB Molecule:mmcr;
PDBTitle: structure of the mitomycin 7-o-methyltransferase mmcr
73c3d2lC_



not modelled 99.9 17 PDB header:transferase
Chain: C: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of sam-dependent methyltransferase (zp_00538691.1)2 from exiguobacterium sp. 255-15 at 1.90 a resolution
74c1x1aA_



not modelled 99.9 21 PDB header:transferase
Chain: A: PDB Molecule:crtf-related protein;
PDBTitle: crystal structure of bchu complexed with s-adenosyl-l-methionine
75c3bxoA_



not modelled 99.9 14 PDB header:transferase
Chain: A: PDB Molecule:n,n-dimethyltransferase;
PDBTitle: crystal structure of streptomyces venezuelae desvi
76c2r3sA_



not modelled 99.9 15 PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative o-methyltransferase (npun_r0239) from2 nostoc punctiforme pcc 73102 at 2.15 a resolution
77c3lecA_



not modelled 99.9 18 PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:nadb-rossmann superfamily protein;
PDBTitle: the crystal structure of a protein in the nadb-rossmann2 superfamily from streptococcus agalactiae to 1.8a
78c3pfhD_



not modelled 99.9 13 PDB header:transferase
Chain: D: PDB Molecule:n-methyltransferase;
PDBTitle: x-ray crystal structure the n,n-dimethyltransferase tylm1 from2 streptomyces fradiae in complex with sah and dtdp-quip3n
79d1o54a_



not modelled 99.9 20 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:tRNA(1-methyladenosine) methyltransferase-like
80d1yzha1



not modelled 99.9 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:TrmB-like
81d2avna1



not modelled 99.8 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:UbiE/COQ5-like
82d2fcaa1



not modelled 99.8 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:TrmB-like
83c3gnlB_



not modelled 99.8 13 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein, duf633, lmof2365_1472;
PDBTitle: structure of uncharacterized protein (lmof2365_1472) from2 listeria monocytogenes serotype 4b
84c3ku1E_



not modelled 99.8 16 PDB header:transferase
Chain: E: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of streptococcus pneumoniae sp1610, a2 putative trna (m1a22) methyltransferase, in complex with s-3 adenosyl-l-methionine
85d1pjza_



not modelled 99.8 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Thiopurine S-methyltransferase
86d1p1ca_



not modelled 99.8 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Guanidinoacetate methyltransferase
87d1dusa_



not modelled 99.8 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Hypothetical protein MJ0882
88c3dp7B_



not modelled 99.8 13 PDB header:transferase
Chain: B: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of sam-dependent methyltransferase from bacteroides2 vulgatus atcc 8482
89c3dxyA_



not modelled 99.8 15 PDB header:transferase
Chain: A: PDB Molecule:trna (guanine-n(7)-)-methyltransferase;
PDBTitle: crystal structure of ectrmb in complex with sam
90d2bzga1



not modelled 99.8 17 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Thiopurine S-methyltransferase
91c2pwyB_



not modelled 99.8 20 PDB header:transferase
Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase;
PDBTitle: crystal structure of a m1a58 trna methyltransferase
92d1qzza2



not modelled 99.8 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Plant O-methyltransferase, C-terminal domain
93d2nxca1



not modelled 99.8 27 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Ribosomal protein L11 methyltransferase PrmA
94d2g72a1



not modelled 99.8 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Arylamine N-methyltransferase
95c3mczB_



not modelled 99.8 15 PDB header:transferase
Chain: B: PDB Molecule:o-methyltransferase;
PDBTitle: the structure of an o-methyltransferase family protein from2 burkholderia thailandensis.
96c3i53A_



not modelled 99.8 14 PDB header:transferase
Chain: A: PDB Molecule:o-methyltransferase;
PDBTitle: crystal structure of an o-methyltransferase (ncsb1) from2 neocarzinostatin biosynthesis in complex with s-adenosyl-l-3 homocysteine (sah)
97c2p8jA_



not modelled 99.8 20 PDB header:transferase
Chain: A: PDB Molecule:s-adenosylmethionine-dependent methyltransferase;
PDBTitle: crystal structure of s-adenosylmethionine-dependent methyltransferase2 (np_349143.1) from clostridium acetobutylicum at 2.00 a resolution
98c3jwhA_



not modelled 99.8 17 PDB header:transferase
Chain: A: PDB Molecule:hen1;
PDBTitle: crystal structure analysis of the methyltransferase domain2 of bacterial-avhen1-c
99c3mtiA_



not modelled 99.8 19 PDB header:transferase
Chain: A: PDB Molecule:rrna methylase;
PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a
100c3grzA_



not modelled 99.8 19 PDB header:transferase
Chain: A: PDB Molecule:ribosomal protein l11 methyltransferase;
PDBTitle: crystal structure of ribosomal protein l11 methylase from2 lactobacillus delbrueckii subsp. bulgaricus
101d2i6ga1



not modelled 99.8 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:TehB-like
102c3ggdA_



not modelled 99.8 15 PDB header:transferase
Chain: A: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of sam-dependent methyltransferase (yp_325210.1)2 from anabaena variabilis atcc 29413 at 2.11 a resolution
103c2vdwA_



not modelled 99.8 15 PDB header:transferase
Chain: A: PDB Molecule:vaccinia virus capping enzyme d1 subunit;
PDBTitle: guanosine n7 methyl-transferase sub-complex (d1-d12) of the2 vaccinia virus mrna capping enzyme
104c2ip2B_



not modelled 99.8 19 PDB header:transferase
Chain: B: PDB Molecule:probable phenazine-specific methyltransferase;
PDBTitle: structure of the pyocyanin biosynthetic protein phzm
105c3p2kA_



not modelled 99.8 17 PDB header:transferase
Chain: A: PDB Molecule:16s rrna methylase;
PDBTitle: structure of an antibiotic related methyltransferase
106c3lstB_



not modelled 99.8 10 PDB header:transferase
Chain: B: PDB Molecule:calo1 methyltransferase;
PDBTitle: crystal structure of calo1, methyltransferase in calicheamicin2 biosynthesis, sah bound form
107d1l3ia_



not modelled 99.8 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Precorrin-6Y methyltransferase (CbiT)
108c2g8nB_



not modelled 99.8 15 PDB header:transferase
Chain: B: PDB Molecule:phenylethanolamine n-methyltransferase;
PDBTitle: structure of hpnmt with inhibitor 3-hydroxymethyl-7-(n-4-2 chlorophenylaminosulfonyl)-thiq and adohcy
109c3cggB_



not modelled 99.8 20 PDB header:transferase
Chain: B: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of tehb-like sam-dependent methyltransferase2 (np_600671.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.00 a resolution
110c2pxxA_



not modelled 99.8 17 PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein mgc2408;
PDBTitle: human putative methyltransferase mgc2408
111c3bgdB_



not modelled 99.8 20 PDB header:transferase
Chain: B: PDB Molecule:thiopurine s-methyltransferase;
PDBTitle: thiopurine s-methyltransferase
112c3giwA_



not modelled 99.8 14 PDB header:unknown function
Chain: A: PDB Molecule:protein of unknown function duf574;
PDBTitle: crystal structure of a duf574 family protein (sav_2177) from2 streptomyces avermitilis ma-4680 at 1.45 a resolution
113d1tw3a2



not modelled 99.8 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Plant O-methyltransferase, C-terminal domain
114d1m6ya2



not modelled 99.8 22 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:MraW-like putative methyltransferases
115c3njrB_



not modelled 99.8 21 PDB header:transferase
Chain: B: PDB Molecule:precorrin-6y methylase;
PDBTitle: crystal structure of c-terminal domain of precorrin-6y c5,15-2 methyltransferase from rhodobacter capsulatus
116d1vbfa_



not modelled 99.8 17 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Protein-L-isoaspartyl O-methyltransferase
117d1af7a2



not modelled 99.8 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Chemotaxis receptor methyltransferase CheR, C-terminal domain
118c3eeyJ_



not modelled 99.8 17 PDB header:transferase
Chain: J: PDB Molecule:putative rrna methylase;
PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum
119c3e05B_



not modelled 99.8 19 PDB header:transferase
Chain: B: PDB Molecule:precorrin-6y c5,15-methyltransferase (decarboxylating);
PDBTitle: crystal structure of precorrin-6y c5,15-methyltransferase from2 geobacter metallireducens gs-15
120c3lpmA_



not modelled 99.8 10 PDB header:transferase
Chain: A: PDB Molecule:putative methyltransferase;
PDBTitle: crystal structure of putative methyltransferase small domain protein2 from listeria monocytogenes

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0