PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3mq2A_

Fold library id	PDB Header	Molecule	Title
c3mq2A_	PDB header: transferase	Chain: A: PDB Molecule: 16s rrna methyltransferase;	PDBTitle: crystal structure of 16s rrna methyltranferase kamb

Links to external resources
Added to library: Sat Dec 11 14:00:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R R V V G K R V Q E F S D A E F E Q L R S Q Y D D V V L D V G T G D G K H P Y K V A R Q N P S R L V V A L D A D K S R M E K I S A K A A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S S S
T T
T T S
G G G G T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K P A K G G L P N L L Y L W A T A E R L P P L S G V G E L H V L M P W G S L L R G V L G S S P E M L R G M A A V C R P G A S F L V A L N L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
T T
S T T
S
S
T S S S T G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A W R P S V P E V G E H P E P T P D S A D E W L A P R Y A E A G W K L A D C R Y L E P E E V A G L E T S W T R R L H S S R D R F D V L A L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G B T T B
G G G T T
T T
T
T T T
S S
S

. . . . .

Sequence G T I S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	R	V	V	G	K	R	V	Q	E	F	S	D	A	E	F	E	Q	L	R	S	Q	Y	D	D	V	V	L	D	V	G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	P	S	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T															T	T	S	S							S		T	T												T	T								S		G	G	G	G								T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	P	A	K	G	G	L	P	N	L	L	Y	L	W	A	T	A	E	R	L	P	P	L	S	G	V	G	E	L	H	V	L	M	P	W	G	S	L	L	R	G	V	L	G	S	S	P	E	M	L	R	G	M	A	A	V	C	R	P	G	A	S	F	L	V	A	L	N	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T			T	T								S	T	T			S											S											T	S	S	S									T													G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	W	R	P	S	V	P	E	V	G	E	H	P	E	P	T	P	D	S	A	D	E	W	L	A	P	R	Y	A	E	A	G	W	K	L	A	D	C	R	Y	L	E	P	E	E	V	A	G	L	E	T	S	W	T	R	R	L	H	S	S	R	D	R	F	D	V	L	A	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	B	T	T	B		G	G	G	T	T																				T	T																	T			T						T	T			S	S		S
	.	.	.	.	.
Sequence	G	T	I	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)