PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3gnlB_

Fold library id	PDB Header	Molecule	Title
c3gnlB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized protein, duf633, lmof2365_1472;	PDBTitle: structure of uncharacterized protein (lmof2365_1472) from2 listeria monocytogenes serotype 4b

Links to external resources
Added to library: Sat Aug 28 22:39:17 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q L S K R L E K V A S Y I T K N E R I A D I G S D H A Y L P C F A V K N Q T A S F A I A G E V V D G P F Q S A Q K Q V R S S G L T E Q I D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T
S T T T T S S S T T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R K G N G L A V I E K K D A I D T I V I A G X G G T L I R T I L E E G A A K L A G V T K L I L Q P N I A A W Q L R E W S E Q N N W L I T S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G G
G G G
T G G G G T T
S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A I L R E D N K V Y E I X V L A P S E K P V T W T K Q E I F F G P C L L K E Q S A I F K S K W R H E A N T W Q N I I Q T I S N N Q P V S T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T S S S

. . . . . . . . . 220 . . . . . . . . . 230

Sequence N Q A K I R E L E H K I A L V E D V L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	L	S	K	R	L	E	K	V	A	S	Y	I	T	K	N	E	R	I	A	D	I	G	S	D	H	A	Y	L	P	C	F	A	V	K	N	Q	T	A	S	F	A	I	A	G	E	V	V	D	G	P	F	Q	S	A	Q	K	Q	V	R	S	S	G	L	T	E	Q	I	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			S	S							T		S	T	T									T	T	S									S	S	T	T													T		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	K	G	N	G	L	A	V	I	E	K	K	D	A	I	D	T	I	V	I	A	G	X	G	G	T	L	I	R	T	I	L	E	E	G	A	A	K	L	A	G	V	T	K	L	I	L	Q	P	N	I	A	A	W	Q	L	R	E	W	S	E	Q	N	N	W	L	I	T	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	G	G	G	G			G	G	G																						T	G	G	G	G	T	T									S	S													T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	L	R	E	D	N	K	V	Y	E	I	X	V	L	A	P	S	E	K	P	V	T	W	T	K	Q	E	I	F	F	G	P	C	L	L	K	E	Q	S	A	I	F	K	S	K	W	R	H	E	A	N	T	W	Q	N	I	I	Q	T	I	S	N	N	Q	P	V	S	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T												S	S																																											T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Sequence	N	Q	A	K	I	R	E	L	E	H	K	I	A	L	V	E	D	V	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)