PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dlcA_

Fold library id	PDB Header	Molecule	Title
c3dlcA_	PDB header: transferase	Chain: A: PDB Molecule: putative s-adenosyl-l-methionine-dependent	PDBTitle: crystal structure of a putative s-adenosyl-l-methionine-2 dependent methyltransferase (np_988299.1) from3 methanococcus maripaludis jj (dsm 2067) at 1.15 a4 resolution

Links to external resources
Added to library: Tue Mar 16 12:08:31 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G X S E N K K K F D K K G A K N X D E I S K T L F A P I Y P I I A E N I I N R F G I T A G T C I D I G S G P G A L S I A L A K Q S D F S I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T T T T
T
T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A L D F S K H X N E I A L K N I A D A N L N D R I Q I V Q G D V H N I P I E D N Y A D L I V S R G S V F F W E D V A T A F R E I Y R I L K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T T
B T T B
S S
T T
S
G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G G K T Y I G G G F G N K E L R D S I S A E X I R K N P D W K E F N R K N I S Q E N V E R F Q N V L D E I G I S S Y E I I L G D E G F W I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S S T
S S T T

. . . . . . . . .

Sequence I S K T D Q E V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	X	S	E	N	K	K	K	F	D	K	K	G	A	K	N	X	D	E	I	S	K	T	L	F	A	P	I	Y	P	I	I	A	E	N	I	I	N	R	F	G	I	T	A	G	T	C	I	D	I	G	S	G	P	G	A	L	S	I	A	L	A	K	Q	S	D	F	S	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S													T	T	T	T	T																								T		T	T	S										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	D	F	S	K	H	X	N	E	I	A	L	K	N	I	A	D	A	N	L	N	D	R	I	Q	I	V	Q	G	D	V	H	N	I	P	I	E	D	N	Y	A	D	L	I	V	S	R	G	S	V	F	F	W	E	D	V	A	T	A	F	R	E	I	Y	R	I	L	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S															T	T		T	T	T							B	T	T	B		S	S		T	T									S		G	G	G		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	K	T	Y	I	G	G	G	F	G	N	K	E	L	R	D	S	I	S	A	E	X	I	R	K	N	P	D	W	K	E	F	N	R	K	N	I	S	Q	E	N	V	E	R	F	Q	N	V	L	D	E	I	G	I	S	S	Y	E	I	I	L	G	D	E	G	F	W	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S																T	T									S	S															T		S	S							T	T
	.	.	.	.	.	.	.	.	.
Sequence	I	S	K	T	D	Q	E	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			S		S