PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dp7B_

Fold library id	PDB Header	Molecule	Title
c3dp7B_	PDB header: transferase	Chain: B: PDB Molecule: sam-dependent methyltransferase;	PDBTitle: crystal structure of sam-dependent methyltransferase from2 bacteroides vulgatus atcc 8482

Links to external resources
Added to library: Tue Mar 16 12:26:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T K E Q C T A A E A Q R L A Q E I A F G P V V F Q V S R L M L K F G I F Q L L S G K R E G Y T L Q E I S G R T G L T R Y A A Q V L L E A S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T T T T
T T
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T I G T I L L E E D R Y V L A K A G W F L L N D K M A R V N M E F N H D V N Y Q G L F H L E E A L L N G R P E G L K V F G E W P T I Y E G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
T T T T S S
G G G G G T
S S S T T T G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S Q L P E Q V Q K S W F G F D H F Y S D Q S F G K A L E I V F S H H P K R L L D I G G N T G K W A T Q C V Q Y N K E V E V T I V D L P Q Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S
T S
S
T T
S T
T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence E M M R K Q T A G L S G S E R I H G H G A N L L D R D V P F P T G F D A V W M S Q F L D C F S E E E V I S I L T R V A Q S I G K D S K V Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T G G G
S S
T T S
S S
S T T S
T T
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence M E T L W D R Q R Y E T A S Y C L T Q I S L Y F T A M A N G N S K M F H S D D L I R C I E N A G L E V E E I Q D N I G L G H S I L Q C R L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S S T S
S S
S
T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	E	Q	C	T	A	A	E	A	Q	R	L	A	Q	E	I	A	F	G	P	V	V	F	Q	V	S	R	L	M	L	K	F	G	I	F	Q	L	L	S	G	K	R	E	G	Y	T	L	Q	E	I	S	G	R	T	G	L	T	R	Y	A	A	Q	V	L	L	E	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				S	T	T										T														T	T									T	T												T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	I	G	T	I	L	L	E	E	D	R	Y	V	L	A	K	A	G	W	F	L	L	N	D	K	M	A	R	V	N	M	E	F	N	H	D	V	N	Y	Q	G	L	F	H	L	E	E	A	L	L	N	G	R	P	E	G	L	K	V	F	G	E	W	P	T	I	Y	E	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S					T	T																											T	T					T	T								S	S		G	G	G	G	G	T				S	S	S	T	T	T	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	Q	L	P	E	Q	V	Q	K	S	W	F	G	F	D	H	F	Y	S	D	Q	S	F	G	K	A	L	E	I	V	F	S	H	H	P	K	R	L	L	D	I	G	G	N	T	G	K	W	A	T	Q	C	V	Q	Y	N	K	E	V	E	V	T	I	V	D	L	P	Q	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S															T	S		S											T	T			S						T		T	T												S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	M	M	R	K	Q	T	A	G	L	S	G	S	E	R	I	H	G	H	G	A	N	L	L	D	R	D	V	P	F	P	T	G	F	D	A	V	W	M	S	Q	F	L	D	C	F	S	E	E	E	V	I	S	I	L	T	R	V	A	Q	S	I	G	K	D	S	K	V	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T		T	T	G	G	G								S	S		T	T	S							S						S		S	T	T	S														T	T			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	M	E	T	L	W	D	R	Q	R	Y	E	T	A	S	Y	C	L	T	Q	I	S	L	Y	F	T	A	M	A	N	G	N	S	K	M	F	H	S	D	D	L	I	R	C	I	E	N	A	G	L	E	V	E	E	I	Q	D	N	I	G	L	G	H	S	I	L	Q	C	R	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G		S	S																	T	S		S	S			S													T	T											T	T	T