PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3pfhD_

Fold library id	PDB Header	Molecule	Title
c3pfhD_	PDB header: transferase	Chain: D: PDB Molecule: n-methyltransferase;	PDBTitle: x-ray crystal structure the n,n-dimethyltransferase tylm1 from2 streptomyces fradiae in complex with sah and dtdp-quip3n

Links to external resources
Added to library: Sat Dec 18 19:04:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P Q A D Y S G E I A E L Y D L V H Q G K G K D Y H R E A A D L A A L V R R H S P K A A S L L D V A C G T G M H L R H L A D S F G T V E G L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S T T
T
T T S T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L S A D M L A I A R R R N P D A V L H H G D M R D F S L G R R F S A V T C M F S S I G H L A G Q A E L D A A L E R F A A H V L P D G V V V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T S S B T T B
S
T T G G G G S
S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E P W W F P E N F T P G Y V A A G T V E A G G T T V T R V S H S S R E G E A T R I E V H Y L V A G P D R G I T H H E E S H R I T L F T R E Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
T T T T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 .

Sequence Y E R A F T A A G L S V E F M P G G P S G R G L F T G L P G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S T T T S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	Q	A	D	Y	S	G	E	I	A	E	L	Y	D	L	V	H	Q	G	K	G	K	D	Y	H	R	E	A	A	D	L	A	A	L	V	R	R	H	S	P	K	A	A	S	L	L	D	V	A	C	G	T	G	M	H	L	R	H	L	A	D	S	F	G	T	V	E	G	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																T	T																		S	T	T								T		T	T	S							T	T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	A	D	M	L	A	I	A	R	R	R	N	P	D	A	V	L	H	H	G	D	M	R	D	F	S	L	G	R	R	F	S	A	V	T	C	M	F	S	S	I	G	H	L	A	G	Q	A	E	L	D	A	A	L	E	R	F	A	A	H	V	L	P	D	G	V	V	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	T	T	S					S	B	T	T	B				S										T	T	G	G	G	G	S		S														T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	P	W	W	F	P	E	N	F	T	P	G	Y	V	A	A	G	T	V	E	A	G	G	T	T	V	T	R	V	S	H	S	S	R	E	G	E	A	T	R	I	E	V	H	Y	L	V	A	G	P	D	R	G	I	T	H	H	E	E	S	H	R	I	T	L	F	T	R	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G			T	T										T	T													T	T													T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Sequence	Y	E	R	A	F	T	A	A	G	L	S	V	E	F	M	P	G	G	P	S	G	R	G	L	F	T	G	L	P	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T							S	S	T	T	T	S	S								T