PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3lpmA_

Fold library id	PDB Header	Molecule	Title
c3lpmA_	PDB header: transferase	Chain: A: PDB Molecule: putative methyltransferase;	PDBTitle: crystal structure of putative methyltransferase small domain2 protein from listeria monocytogenes

Links to external resources
Added to library: Sat Aug 28 17:31:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K L K L I G D E R L D Y L L A E N L R I I Q S P S V F S F S I D A V L L A K F S Y L P I R K G K I I D L C S G N G I I P L L L S T R T K A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T B T T T B
S S
T T
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I V G V E I Q E R L A D X A K R S V A Y N Q L E D Q I E I I E Y D L K K I T D L I P K E R A D I V T C N P P X C T L E D T I R V A A S L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T T
S
G G G G G G T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q G G K A N F V H R P E R L L D I I D I X R K Y R L E P K R I Q F V H P R S D R E A N T V L V E G I K D G K P G V K Y V P P V I V Y D E L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T S S T T S
S T
S
B
T T S

. . . . . . . . . 220 . .

Sequence E Y T P V I K E I L Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	L	K	L	I	G	D	E	R	L	D	Y	L	L	A	E	N	L	R	I	I	Q	S	P	S	V	F	S	F	S	I	D	A	V	L	L	A	K	F	S	Y	L	P	I	R	K	G	K	I	I	D	L	C	S	G	N	G	I	I	P	L	L	L	S	T	R	T	K	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T							T	T	T	T						B	T	T	T	B																	S	S							T	T		T	T	T								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	V	G	V	E	I	Q	E	R	L	A	D	X	A	K	R	S	V	A	Y	N	Q	L	E	D	Q	I	E	I	I	E	Y	D	L	K	K	I	T	D	L	I	P	K	E	R	A	D	I	V	T	C	N	P	P	X	C	T	L	E	D	T	I	R	V	A	A	S	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S														T	T		T	T	T						S		G	G	G	G	G	G	T	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	G	G	K	A	N	F	V	H	R	P	E	R	L	L	D	I	I	D	I	X	R	K	Y	R	L	E	P	K	R	I	Q	F	V	H	P	R	S	D	R	E	A	N	T	V	L	V	E	G	I	K	D	G	K	P	G	V	K	Y	V	P	P	V	I	V	Y	D	E	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T											T	T											S	S	T	T	S			S									T			S											B		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	E	Y	T	P	V	I	K	E	I	L	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B