PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ggdA_

Fold library id	PDB Header	Molecule	Title
c3ggdA_	PDB header: transferase	Chain: A: PDB Molecule: sam-dependent methyltransferase;	PDBTitle: crystal structure of sam-dependent methyltransferase2 (yp_325210.1) from anabaena variabilis atcc 29413 at 2.113 a resolution

Links to external resources
Added to library: Sun Aug 29 01:50:03 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E K L S A I K K P D I N V A D A W E Q Y W N K T L V N S T P V L W D A N V E R A V V V D L P R F E L L F N P E L P L I D F A C G N G T Q T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
T T
G G G T T T T S
T T S
T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F L S Q F F P R V I G L D V S K S A L E I A A K E N T A A N I S Y R L L D G L V P E Q A A Q I H S E I G D A N I Y X R T G F H H I P V E K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
S
T T
T T
S
S S S T T S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E L L G Q S L R I L L G K Q G A X Y L I E L G T G C I D F F N S L L E K Y G Q L P Y E L L L V X E H G I R P G I F T A E D I E L Y F P D F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S S
T T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . .

Sequence I L S Q G E G L F Q S I H K L P D G N Y A T P P A F W A V I K H R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S
B
T T S
B
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	K	L	S	A	I	K	K	P	D	I	N	V	A	D	A	W	E	Q	Y	W	N	K	T	L	V	N	S	T	P	V	L	W	D	A	N	V	E	R	A	V	V	V	D	L	P	R	F	E	L	L	F	N	P	E	L	P	L	I	D	F	A	C	G	N	G	T	Q	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S																						T				T	T				G	G	G	T									T	T	T	S		T	T	S						T		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	L	S	Q	F	F	P	R	V	I	G	L	D	V	S	K	S	A	L	E	I	A	A	K	E	N	T	A	A	N	I	S	Y	R	L	L	D	G	L	V	P	E	Q	A	A	Q	I	H	S	E	I	G	D	A	N	I	Y	X	R	T	G	F	H	H	I	P	V	E	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S							S												S			T	T								T	T														S							S	S	S	T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	L	L	G	Q	S	L	R	I	L	L	G	K	Q	G	A	X	Y	L	I	E	L	G	T	G	C	I	D	F	F	N	S	L	L	E	K	Y	G	Q	L	P	Y	E	L	L	L	V	X	E	H	G	I	R	P	G	I	F	T	A	E	D	I	E	L	Y	F	P	D	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T										T	T													S	S										T	T	T																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Sequence	I	L	S	Q	G	E	G	L	F	Q	S	I	H	K	L	P	D	G	N	Y	A	T	P	P	A	F	W	A	V	I	K	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B				S		B		T	T	S		B				B