Email l.a.kelley@imperial.ac.uk Description P30748 Date Thu Jan 5 11:46:22 GMT 2012 Unique Job ID 80261a79cacc719f

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1fm0d_ 100.0 100 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:MoaD 2 c3po0A_ 99.9 25 PDB header:protein binding Chain: A: PDB Molecule:small archaeal modifier protein 1; PDBTitle: crystal structure of samp1 from haloferax volcanii 3 c2qieB_ 99.9 26 PDB header:transferase Chain: B: PDB Molecule:molybdopterin synthase small subunit; PDBTitle: staphylococcus aureus molybdopterin synthase in complex2 with precursor z 4 c2g1eA_ 99.9 23 PDB header:transferase Chain: A: PDB Molecule:hypothetical protein ta0895; PDBTitle: solution structure of ta0895 5 c2l52A_ 99.9 27 PDB header:protein binding Chain: A: PDB Molecule:methanosarcina acetivorans samp1 homolog; PDBTitle: solution structure of the small archaeal modifier protein 1 (samp1)2 from methanosarcina acetivorans 6 d1vjka_ 99.9 36 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:MoaD 7 c1v8cA_ 99.9 27 PDB header:protein binding Chain: A: PDB Molecule:moad related protein; PDBTitle: crystal structure of moad related protein from thermus2 thermophilus hb8 8 d1v8ca1 99.9 25 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:MoaD 9 c3rpfC_ 99.8 30 PDB header:transferase Chain: C: PDB Molecule:molybdopterin converting factor, subunit 1 (moad); PDBTitle: protein-protein complex of subunit 1 and 2 of molybdopterin-converting2 factor from helicobacter pylori 26695 10 c3dwmA_ 99.8 25 PDB header:transferase Chain: A: PDB Molecule:9.5 kda culture filtrate antigen cfp10a; PDBTitle: crystal structure of mycobacterium tuberculosis cyso, an antigen 11 c2qjlA_ 99.8 25 PDB header:signaling protein Chain: A: PDB Molecule:ubiquitin-related modifier 1; PDBTitle: crystal structure of urm1 12 d1xo3a_ 99.8 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:C9orf74 homolog 13 d1wgka_ 99.7 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:C9orf74 homolog 14 c2k9xA_ 99.7 26 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of urm1 from trypanosoma brucei 15 d1zud21 98.3 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 16 c2kl0A_ 98.2 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative thiamin biosynthesis this; PDBTitle: solution nmr structure of rhodopseudomonas palustris rpa3574,2 northeast structural genomics consortium (nesg) target rpr325 17 d1rwsa_ 98.2 30 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 18 c3cwiA_ 97.7 22 PDB header:biosynthetic protein Chain: A: PDB Molecule:thiamine-biosynthesis protein this; PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137 19 d2cu3a1 97.3 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 20 d1tygb_ 96.9 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 21 d1tkea1 not modelled 95.9 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 22 c3hvzB_ not modelled 95.3 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the tgs domain of the clolep_03100 protein from2 clostridium leptum, northeast structural genomics consortium target3 qlr13a 23 d1ryja_ not modelled 95.0 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 24 d1wxqa2 not modelled 94.9 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:G domain-linked domain 25 c2kmmA_ not modelled 94.9 21 PDB header:hydrolase Chain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'- PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481) 26 c1tygG_ not modelled 94.9 20 PDB header:biosynthetic protein Chain: G: PDB Molecule:yjbs; PDBTitle: structure of the thiazole synthase/this complex 27 d2hj1a1 not modelled 93.4 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:HI0395-like 28 c2hj1A_ not modelled 93.4 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a 3d domain-swapped dimer of protein hi0395 from2 haemophilus influenzae 29 d1ud7a_ not modelled 91.9 8 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 30 d1c3ta_ not modelled 91.6 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 31 c1wwtA_ not modelled 89.6 17 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase, cytoplasmic; PDBTitle: solution structure of the tgs domain from human threonyl-2 trna synthetase 32 c1yx5B_ not modelled 89.6 6 PDB header:hydrolase Chain: B: PDB Molecule:ubiquitin; PDBTitle: solution structure of s5a uim-1/ubiquitin complex 33 c2ekiA_ not modelled 89.0 19 PDB header:signaling protein Chain: A: PDB Molecule:developmentally-regulated gtp-binding protein 1; PDBTitle: solution structures of the tgs domain of human2 developmentally-regulated gtp-binding protein 1 34 d1wh3a_ not modelled 86.9 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 35 d1v5oa_ not modelled 83.9 17 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 36 c1tkeA_ not modelled 82.2 14 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase complexed with serine 37 d1nyra2 not modelled 80.6 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 38 c2k8hA_ not modelled 78.0 13 PDB header:signaling protein Chain: A: PDB Molecule:small ubiquitin protein; PDBTitle: solution structure of sumo from trypanosoma brucei 39 d2g1la1 not modelled 77.4 27 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 40 d1euvb_ not modelled 77.2 18 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 41 c3fm8A_ not modelled 75.4 32 PDB header:transport protein/hydrolase activator Chain: A: PDB Molecule:kinesin-like protein kif13b; PDBTitle: crystal structure of full length centaurin alpha-1 bound with the fha2 domain of kif13b (capri target) 42 c2k6pA_ not modelled 74.2 12 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein hp_1423; PDBTitle: solution structure of hypothetical protein, hp1423 43 c2eh0A_ not modelled 74.1 27 PDB header:transport protein Chain: A: PDB Molecule:kinesin-like protein kif1b; PDBTitle: solution structure of the fha domain from human kinesin-2 like protein kif1b 44 c2jxxA_ not modelled 70.1 21 PDB header:protein binding Chain: A: PDB Molecule:nfatc2-interacting protein; PDBTitle: nmr solution structure of ubiquitin-like domain of2 nfatc2ip. northeast structural genomics consortium target3 hr5627 45 c2l7rA_ not modelled 69.7 10 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin-like protein fubi; PDBTitle: solution nmr structure of n-terminal ubiquitin-like domain of fubi, a2 ribosomal protein s30 precursor from homo sapiens. northeast3 structural genomics consortium (nesg) target hr6166 46 c1dm9A_ not modelled 69.6 5 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical 15.5 kd protein in mrca-pcka PDBTitle: heat shock protein 15 kd 47 d1dm9a_ not modelled 69.6 5 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Heat shock protein 15 kD 48 c3tixA_ not modelled 69.2 18 PDB header:gene regulation/protein binding Chain: A: PDB Molecule:ubiquitin-like protein smt3, rna-induced transcriptional PDBTitle: crystal structure of the chp1-tas3 complex core 49 d2io3b1 not modelled 67.0 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 50 d1wgga_ not modelled 66.0 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 51 c3goeA_ not modelled 63.7 16 PDB header:recombination, replication Chain: A: PDB Molecule:dna repair protein rad60; PDBTitle: molecular mimicry of sumo promotes dna repair 52 d1we7a_ not modelled 63.1 8 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 53 d1v86a_ not modelled 62.3 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 54 d1wlna1 not modelled 60.6 23 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 55 d1v5ta_ not modelled 59.5 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 56 c1wxqA_ not modelled 57.5 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 57 c3m62B_ not modelled 56.9 16 PDB header:ligase/protein binding Chain: B: PDB Molecule:uv excision repair protein rad23; PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of rad23 58 d1yqba1 not modelled 55.5 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 59 d1vioa2 not modelled 52.1 26 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Pseudouridine synthase RsuA N-terminal domain 60 d2ff4a3 not modelled 51.3 23 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 61 d1wm3a_ not modelled 49.4 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 62 d1wjua_ not modelled 49.4 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 63 d1gxca_ not modelled 48.3 31 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 64 c1gxcA_ not modelled 48.3 31 PDB header:phosphoprotein-binding domain Chain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: fha domain from human chk2 kinase in complex with a2 synthetic phosphopeptide 65 c2kdiA_ not modelled 48.1 5 PDB header:signaling protein Chain: A: PDB Molecule:ubiquitin, vacuolar protein sorting-associated PDBTitle: solution structure of a ubiquitin/uim fusion protein 66 d2affa1 not modelled 47.4 23 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 67 d1wz0a1 not modelled 46.5 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 68 c2kd0A_ not modelled 46.3 9 PDB header:signaling protein Chain: A: PDB Molecule:lrr repeats and ubiquitin-like domain-containing PDBTitle: nmr solution structure of o64736 protein from arabidopsis2 thaliana. northeast structural genomics consortium mega3 target ar3445a 69 d1c06a_ not modelled 45.3 18 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 70 d1sifa_ not modelled 44.1 7 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 71 d1p9ka_ not modelled 43.7 18 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 72 d1oqya4 not modelled 42.8 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 73 c2jqlA_ not modelled 42.3 27 PDB header:cell cycle Chain: A: PDB Molecule:dna damage response protein kinase dun1; PDBTitle: nmr structure of the yeast dun1 fha domain in complex with2 a doubly phosphorylated (pt) peptide derived from rad533 scd1 74 d2uubd1 not modelled 41.7 32 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 75 d2uyzb1 not modelled 40.6 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 76 c2k25A_ not modelled 39.8 6 PDB header:unknown function Chain: A: PDB Molecule:ubb; PDBTitle: automated nmr structure of the ubb by fapsy 77 c3a4rB_ not modelled 39.1 21 PDB header:transcription Chain: B: PDB Molecule:nfatc2-interacting protein; PDBTitle: the crystal structure of sumo-like domain 2 in nip45 78 d2piea1 not modelled 38.9 14 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 79 c2klcA_ not modelled 38.7 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr solution structure of human ubiquitin-like domain of2 ubiquilin 1, northeast structural genomics consortium3 (nesg) target ht5a 80 d1lgpa_ not modelled 38.1 22 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 81 c2ekeC_ not modelled 37.0 15 PDB header:ligase/protein binding Chain: C: PDB Molecule:ubiquitin-like protein smt3; PDBTitle: structure of a sumo-binding-motif mimic bound to smt3p-2 ubc9p: conservation of a noncovalent ubiquitin-like3 protein-e2 complex as a platform for selective4 interactions within a sumo pathway 82 c1r21A_ not modelled 36.8 23 PDB header:cell cycle Chain: A: PDB Molecule:antigen ki-67; PDBTitle: solution structure of human ki67 fha domain 83 d1kf6b2 not modelled 36.4 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 84 d1wiaa_ not modelled 36.2 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 85 c3bbnD_ not modelled 36.1 18 PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 86 c2kklA_ not modelled 35.8 38 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mb1858; PDBTitle: solution nmr structure of fha domain of mb1858 from2 mycobacterium bovis. northeast structural genomics3 consortium target mbr243c (24-155). 87 c3m63B_ not modelled 34.8 19 PDB header:ligase/protein binding Chain: B: PDB Molecule:ubiquitin domain-containing protein dsk2; PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of dsk2 88 c2ns5A_ not modelled 34.8 15 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: the conserved n-terminal domain of par-3 adopts a novel pb1-2 like structure required for par-3 oligomerization and3 apical membrane localization 89 c1kskA_ not modelled 34.5 16 PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: structure of rsua 90 c1nyqA_ not modelled 34.4 22 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase 1; PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate 91 d2bwfa1 not modelled 33.7 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 92 c3gqsB_ not modelled 33.6 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:adenylate cyclase-like protein; PDBTitle: crystal structure of the fha domain of ct664 protein from chlamydia2 trachomatis 93 d1a5ra_ not modelled 32.6 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 94 d1uela_ not modelled 32.1 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 95 c3kt9A_ not modelled 31.5 13 PDB header:hydrolase Chain: A: PDB Molecule:aprataxin; PDBTitle: aprataxin fha domain 96 d1g3ga_ not modelled 31.0 27 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 97 c3hx1B_ not modelled 30.3 29 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:slr1951 protein; PDBTitle: crystal structure of the slr1951 protein from synechocystis sp.2 northeast structural genomics consortium target sgr167a 98 d1ndda_ not modelled 29.0 7 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 99 c2ojrA_ not modelled 28.8 5 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin; PDBTitle: structure of ubiquitin solved by sad using the lanthanide-2 binding tag 100 d1g6ga_ not modelled 28.5 29 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 101 c3dh3C_ not modelled 28.3 18 PDB header:isomerase/rna Chain: C: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of rluf in complex with a 22 nucleotide2 rna substrate 102 c3u7zA_ not modelled 27.2 26 PDB header:metal binding protein Chain: A: PDB Molecule:putative metal binding protein rumgna_00854; PDBTitle: crystal structure of a putative metal binding protein rumgna_008542 (zp_02040092.1) from ruminococcus gnavus atcc 29149 at 1.30 a3 resolution 103 d2gy9d1 not modelled 27.0 27 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 104 c2kdbA_ not modelled 26.3 14 PDB header:protein binding Chain: A: PDB Molecule:homocysteine-responsive endoplasmic reticulum- PDBTitle: solution structure of human ubiquitin-like domain of2 herpud2_9_85, northeast structural genomics consortium3 (nesg) target ht53a 105 d1wx8a1 not modelled 26.3 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 106 c1qf6A_ not modelled 26.3 12 PDB header:ligase/rna Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: structure of e. coli threonyl-trna synthetase complexed with its2 cognate trna 107 d1j8ca_ not modelled 26.1 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 108 d1bt0a_ not modelled 26.0 7 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 109 d1yjma1 not modelled 25.4 17 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 110 d1p1aa_ not modelled 25.4 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 111 c3poaA_ not modelled 25.1 33 PDB header:peptide binding protein Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: structural and functional analysis of phosphothreonine-dependent fha2 domain interactions 112 d1wx7a1 not modelled 24.0 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 113 d2bs2b2 not modelled 23.9 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 114 d1wgda_ not modelled 23.8 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 115 d1wxma1 not modelled 23.6 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 116 c2dzmA_ not modelled 22.7 17 PDB header:structural genomics unknown function Chain: A: PDB Molecule:fas-associated factor 1; PDBTitle: solution structure of the ubiquitin-like domain in human2 fas-associated factor 1 (hfaf1) 117 d1wf9a1 not modelled 22.5 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 118 c1yj5C_ not modelled 22.2 17 PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme 119 c1qzeA_ not modelled 22.1 15 PDB header:replication Chain: A: PDB Molecule:uv excision repair protein rad23 homolog a; PDBTitle: hhr23a protein structure based on residual dipolar coupling2 data 120 d2zeqa1 not modelled 22.1 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related