PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1qzeA_

Fold library id	PDB Header	Molecule	Title
c1qzeA_	PDB header: replication	Chain: A: PDB Molecule: uv excision repair protein rad23 homolog a;	PDBTitle: hhr23a protein structure based on residual dipolar coupling2 data

Links to external resources
Added to library: Tue Mar 16 14:02:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S A V T I T L K T L Q Q Q T F K I R M E P D E T V K V L K E K I E A E K G R D A F P V A G Q K L I Y A G K I L S D D V P I R D Y R I D E K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S B T
S S S
S T T S S S S
S S S B T T T T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F V V V M V T G S E Y E T M L T E I M S M G Y E R E R V V A A L R A S Y N N P H R A V E Y L L T L E F L R D Q P Q F Q N M R Q V I Q Q N P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S T T S
T S S G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L L P A L L Q Q L G Q E N P Q L L Q Q I S R H Q E Q F I Q M T P Q E K E A I E R L K A L G F P E S L V I Q A Y F A C E K N E N L A A N F L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
T T T T
S T
S S S S
S S

. . . .

Sequence S Q N F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	V	T	I	T	L	K	T	L	Q	Q	Q	T	F	K	I	R	M	E	P	D	E	T	V	K	V	L	K	E	K	I	E	A	E	K	G	R	D	A	F	P	V	A	G	Q	K	L	I	Y	A	G	K	I	L	S	D	D	V	P	I	R	D	Y	R	I	D	E	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T									T	T	S	B												T		S	S	S			S	T	T					S	S	S	S				S	S	S	B	T	T	T	T	T			T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	V	V	V	M	V	T	G	S	E	Y	E	T	M	L	T	E	I	M	S	M	G	Y	E	R	E	R	V	V	A	A	L	R	A	S	Y	N	N	P	H	R	A	V	E	Y	L	L	T	L	E	F	L	R	D	Q	P	Q	F	Q	N	M	R	Q	V	I	Q	Q	N	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	S			S										S	T	T	S																T	S									S	G	G	G		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	P	A	L	L	Q	Q	L	G	Q	E	N	P	Q	L	L	Q	Q	I	S	R	H	Q	E	Q	F	I	Q	M	T	P	Q	E	K	E	A	I	E	R	L	K	A	L	G	F	P	E	S	L	V	I	Q	A	Y	F	A	C	E	K	N	E	N	L	A	A	N	F	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T	T																				T	T	T											T			S							T		S	S	S	S		S	S
	.	.	.	.
Sequence	S	Q	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T