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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2ojrA_ | PDB header: protein binding | Chain: A: PDB Molecule: ubiquitin; | PDBTitle: structure of ubiquitin solved by sad using the lanthanide-2 binding tag |
Added to library: Tue Mar 16 12:03:53 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | P | G | Y | I | D | T | N | N | D | G | W | I | E | G | D | E | L | Y | I | D | T | N | N | D | G | W | I | E | G | D | E | L | L | A | M | Q | I | F | V | K | T | L | T | G | K | T | I | T | L | E | V | E | P | S | D | T | I | E | N | V | K | A | K | I | Q | D | K | E | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | S | S | S | G | G | G | B | T | T | S | S | S | G | G | G | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Sequence | I | P | P | D | Q | Q | R | L | I | F | A | G | K | Q | L | E | D | G | R | T | L | S | D | Y | N | I | Q | K | E | S | T | L | H | L | V | L | R | L | R | G | ||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | S | B | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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