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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ojrA_

Fold library idPDB HeaderMoleculeTitle
c2ojrA_PDB header: protein bindingChain: A: PDB Molecule: ubiquitin;PDBTitle: structure of ubiquitin solved by sad using the lanthanide-2 binding tag


Added to library: Tue Mar 16 12:03:53 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GPGYIDTNNDGWIEGDELYIDTNNDGWIEGDELLAMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


B

TT
SSS

GGGB


TT
SSS

GGGSS

SSS

TT
B
 .........80.........90.........100.........110
Sequence IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Predicted secondary structure




















SS confidence







































Known secondary structure (DSSP)

TTTTT

SS
BTTTTT

TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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