PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3tixA_

Fold library id	PDB Header	Molecule	Title
c3tixA_	PDB header: gene regulation/protein binding	Chain: A: PDB Molecule: ubiquitin-like protein smt3, rna-induced transcriptional	PDBTitle: crystal structure of the chp1-tas3 complex core

Links to external resources
Added to library: Sat Nov 19 19:41:29 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E T H I N L K V S D G S S E I F F K I K K T T P L R R L M E A F A K R Q G K E M D S L T F L Y D G I E I Q A D Q T P E D L D M E D N D I I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T T
G G G S
T T
S S
T T T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A H R E Q I G G L P S L P F L A C I S D F P E N H G T S R R S A T V S L E R V H E L F T E H W L S N L K N R R E K R Q E L A E E A V Y C R S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G
S S
G G G G
S

. . . . . . . . . 150 . . .

Sequence E M L S Q R K L L A A V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	T	H	I	N	L	K	V	S	D	G	S	S	E	I	F	F	K	I	K	K	T	T	P	L	R	R	L	M	E	A	F	A	K	R	Q	G	K	E	M	D	S	L	T	F	L	Y	D	G	I	E	I	Q	A	D	Q	T	P	E	D	L	D	M	E	D	N	D	I	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S									T	T	S		T											T	T			G	G	G	S					T	T					S	S			T	T	T	T	T			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	H	R	E	Q	I	G	G	L	P	S	L	P	F	L	A	C	I	S	D	F	P	E	N	H	G	T	S	R	R	S	A	T	V	S	L	E	R	V	H	E	L	F	T	E	H	W	L	S	N	L	K	N	R	R	E	K	R	Q	E	L	A	E	E	A	V	Y	C	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	G	G	G												S	S																										G	G	G	G			S
	.	.	.	.	.	.	.	.	.	150	.	.	.
Sequence	E	M	L	S	Q	R	K	L	L	A	A	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T