Fold library entry viewer: c1nyqA_

Added to library: Tue Mar 16 12:56:33 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	N	I	Q	F	P	D	G	N	K	K	A	F	D	K	G	T	T	T	E	D	I	A	Q	S	I	S	P	G	L	R	K	K	A	V	A	G	K	F	N	G	Q	L	V	D	L	T	K	P	L	E	T	D	G	S	I	E	I	V	T	P	G	S	E	E	A	L	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S							S	S	B															T	T							T	S	S				S	S			B		S			B						T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	H	S	T	A	H	L	M	A	H	A	I	K	R	L	Y	G	N	V	K	F	G	V	G	P	V	I	E	G	G	F	Y	Y	D	F	D	I	D	Q	N	I	S	S	D	D	F	E	Q	I	E	K	T	M	K	Q	I	V	N	E	N	M	K	I	E	R	K	V	V	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S										T	T									S	S				T	T	T															T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	E	A	K	E	L	F	S	N	D	E	Y	K	L	E	L	I	D	A	I	P	E	D	E	N	V	T	L	Y	S	Q	G	D	F	T	D	L	C	R	G	V	H	V	P	S	T	A	K	I	K	E	F	K	L	L	S	T	A	G	A	Y	W	R	G	D	S	N	N	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S												S	S	S									T	T							S				S		G	G	G												B		S	T	T		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	Q	R	I	Y	G	T	A	F	F	D	K	K	E	L	K	A	H	L	Q	M	L	E	E	R	K	E	R	D	H	R	K	I	G	K	E	L	E	L	F	T	N	S	Q	L	V	G	A	G	L	P	L	W	L	P	N	G	A	T	I	R	R	E	I	E	R	Y	I	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B									S	S																										T	T						T	T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	E	V	S	M	G	Y	D	H	V	Y	T	P	V	L	A	N	V	D	L	Y	K	T	S	G	H	W	D	H	Y	Q	E	D	M	F	P	P	M	Q	L	D	E	T	E	S	M	V	L	R	P	M	N	C	P	H	H	M	M	I	Y	A	N	K	P	H	S	Y	R	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T								S				T							T	S	T	T	T	T	T	T	T	S				B		S	T	T	S							S		S										T	S			B	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	I	R	I	A	E	L	G	T	M	H	R	Y	E	A	S	G	A	V	S	G	L	Q	R	V	R	G	M	T	L	N	D	S	H	I	F	V	R	P	D	Q	I	K	E	E	F	K	R	V	V	N	M	I	I	D	V	Y	K	D	F	G	F	E	D	Y	S	F	R	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T	T		B	T	T	T	B		S													G	G	G																			T	T					B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	R	D	P	E	D	K	E	K	Y	F	D	D	D	D	M	W	N	K	A	E	N	M	L	K	E	A	A	D	E	L	G	L	S	Y	E	E	A	I	G	E	A	A	F	Y	G	P	K	L	D	V	Q	V	K	T	A	M	G	K	E	E	T	L	S	T	A	Q	L	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				S	S	S	S																					T								T		S	B	T	T	B										T	T	S												S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	L	P	E	R	F	D	L	T	Y	I	G	Q	D	G	E	H	H	R	P	V	V	I	H	R	G	V	V	S	T	M	E	R	F	V	A	F	L	T	E	E	T	K	G	A	F	P	T	W	L	A	P	K	Q	V	Q	I	I	P	V	N	V	D	L	H	Y	D	Y	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T						S	S	S																												T	T				T	T	T		S	S							S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	L	Q	D	E	L	K	S	Q	G	V	R	V	S	I	D	D	R	N	E	K	M	G	Y	K	I	R	E	A	Q	M	Q	K	I	P	Y	Q	I	V	V	G	D	K	E	V	E	N	N	Q	V	N	V	R	Q	Y	G	S	Q	D	Q	E	T	V	E	K	D	E	F	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T									S	S												T	T		S													T							S	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.
Sequence	N	L	V	D	E	I	R	L	K	K	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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