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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3bbnD_

Fold library idPDB HeaderMoleculeTitle
c3bbnD_PDB header: ribosomeChain: D: PDB Molecule: ribosomal protein s4;PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.


Added to library: Tue Mar 16 12:26:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSRYRGPRFKKIRRLGALPGLTNKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGITERQLLKYVR
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Known secondary structure (DSSP)

S

S

TTSSSSSSS


SSS


S

SSS
SSS





TTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence IARKAKGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPQDTIMARD
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Known secondary structure (DSSP) SSS
TTTTTTSBTTTTTTTTTSSSSSTT
TT


TT
B

TT
S
 .........150.........160.........170.........180.........190.........
Sequence EQKSIALIQNSLDLSPREELPKHLTLNPFPYKGLVNQIIDSKWVGLKINELLVVEYYSR
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Known secondary structure (DSSP) STTS
SSSTTTS


TTTTTT
S


GGG


S

TTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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