PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1tkeA_

Fold library id	PDB Header	Molecule	Title
c1tkeA_	PDB header: ligase	Chain: A: PDB Molecule: threonyl-trna synthetase;	PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase complexed with serine

Links to external resources
Added to library: Tue Mar 16 14:09:21 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M P V I T L P D G S Q R H Y D H A V S P M D V A L D I G P G L A K A C I A G R V N G E L V D A C D L I E N D A Q L S I I T A K D E E G L E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
B
T T T T
B
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I R H S C A H L L G H A I K Q L W P H T K M A I G P V I D N G F Y Y D V D L D R T L T Q E D V E A L E K R M H E L A E K N Y D V I K K K V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T T
S S
T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence W H E A R E T F A N R G E S Y K V S I L D E N I A H D D K P G L Y F H E E Y V D M C R G P H V P N M R F C H H F K L M K T A G A Y W R G D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T
T T S
S B G G G
G G G
T

. . . . . . . . . 220 . . . . .

Sequence N N K M L Q R I Y G T A W A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	P	V	I	T	L	P	D	G	S	Q	R	H	Y	D	H	A	V	S	P	M	D	V	A	L	D	I	G	P	G	L	A	K	A	C	I	A	G	R	V	N	G	E	L	V	D	A	C	D	L	I	E	N	D	A	Q	L	S	I	I	T	A	K	D	E	E	G	L	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S						S	S		B																							T	T					T	T			B		S									T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	R	H	S	C	A	H	L	L	G	H	A	I	K	Q	L	W	P	H	T	K	M	A	I	G	P	V	I	D	N	G	F	Y	Y	D	V	D	L	D	R	T	L	T	Q	E	D	V	E	A	L	E	K	R	M	H	E	L	A	E	K	N	Y	D	V	I	K	K	K	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	T	T										T	T									S	S																			T	T			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	H	E	A	R	E	T	F	A	N	R	G	E	S	Y	K	V	S	I	L	D	E	N	I	A	H	D	D	K	P	G	L	Y	F	H	E	E	Y	V	D	M	C	R	G	P	H	V	P	N	M	R	F	C	H	H	F	K	L	M	K	T	A	G	A	Y	W	R	G	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T												S		T	T									T	T						S					S	B	G	G	G														G	G	G		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	N	N	K	M	L	Q	R	I	Y	G	T	A	W	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S