PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ekeC_

Fold library id	PDB Header	Molecule	Title
c2ekeC_	PDB header: ligase/protein binding	Chain: C: PDB Molecule: ubiquitin-like protein smt3;	PDBTitle: structure of a sumo-binding-motif mimic bound to smt3p-2 ubc9p: conservation of a noncovalent ubiquitin-like3 protein-e2 complex as a platform for selective4 interactions within a sumo pathway

Links to external resources
Added to library: Tue Mar 16 13:07:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D P L V P R G S E V K P E V K P E T H I N L K V S D G S S E I F F K I K K T T P L R R L M E A F A K R Q G K E M D S L R F L Y D G I R I Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T S
T T
G G G T T
T

. . . . . . . . . 80 . . . . . . . . . 90 .

Sequence D Q T P E D L D M E D N D I I E A H R E Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	P	L	V	P	R	G	S	E	V	K	P	E	V	K	P	E	T	H	I	N	L	K	V	S	D	G	S	S	E	I	F	F	K	I	K	K	T	T	P	L	R	R	L	M	E	A	F	A	K	R	Q	G	K	E	M	D	S	L	R	F	L	Y	D	G	I	R	I	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S									S	S									T	T	S		T												T			G	G	G						T	T					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Sequence	D	Q	T	P	E	D	L	D	M	E	D	N	D	I	I	E	A	H	R	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T	T	T	T			T	T