Email l.a.kelley@imperial.ac.uk Description P76361 Date Thu Jan 5 12:22:20 GMT 2012 Unique Job ID 6065ac5873f4750b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1vlpa1 61.7 26 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like 2 d1us7b_ 45.1 32 Fold:Hsp90 co-chaperone CDC37 Superfamily:Hsp90 co-chaperone CDC37 Family:Hsp90 co-chaperone CDC37 3 c1us7B_ 45.1 32 PDB header:chaperone Chain: B: PDB Molecule:hsp90 co-chaperone cdc37; PDBTitle: complex of hsp90 and p50 4 c2puyA_ 39.5 26 PDB header:transcription Chain: A: PDB Molecule:phd finger protein 21a; PDBTitle: crystal structure of the bhc80 phd finger 5 d2f7fa2 35.7 25 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:NadC N-terminal domain-like 6 d1k0ga_ 33.6 17 Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase 7 d1ybea2 33.2 26 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like 8 d1i7qa_ 32.7 17 Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase 9 d1i1qa_ 31.5 16 Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase 10 c1vlpA_ 30.0 26 PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of a putative nicotinate phosphoribosyltransferase2 (yor209c, npt1) from saccharomyces cerevisiae at 1.75 a resolution 11 d1j96a_ 29.9 26 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 12 d1weqa_ 28.6 24 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain 13 d1q5ma_ 28.3 33 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 14 d1zbdb_ 26.9 26 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:FYVE, a phosphatidylinositol-3-phosphate binding domain 15 d1yira2 26.6 27 Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like 16 d1ah4a_ 25.2 33 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 17 c3o37D_ 24.0 38 PDB header:transcription/protein binding Chain: D: PDB Molecule:transcription intermediary factor 1-alpha; PDBTitle: crystal structure of trim24 phd-bromo complexed with h3(1-10)k42 peptide 18 d2alra_ 22.6 29 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 19 d1hqta_ 21.8 32 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 20 d3ctaa2 21.5 22 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like 21 c2riqA_ not modelled 20.6 28 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: crystal structure of the third zinc-binding domain of human parp-1 22 c3b4sA_ not modelled 20.0 56 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein luxt; PDBTitle: crystal structure of a luxt domain from vibrio2 parahaemolyticus rimd 2210633 23 d1mn4a_ not modelled 19.6 45 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding domain from NDT80 24 c1yj7A_ not modelled 19.5 19 PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj 25 c2obnA_ not modelled 19.2 26 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a duf1611 family protein (ava_3511) from anabaena2 variabilis atcc 29413 at 2.30 a resolution 26 c1xwhA_ not modelled 19.2 41 PDB header:transcription Chain: A: PDB Molecule:autoimmune regulator; PDBTitle: nmr structure of the first phd finger of autoimmune2 regulator protein (aire1): insights into apeced 27 c2jvnA_ not modelled 18.7 30 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: domain c of human parp-1 28 d2g5fa1 not modelled 16.8 10 Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase 29 d1q4qa_ not modelled 15.6 21 Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat 30 d1iega_ not modelled 15.2 39 Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin 31 c3mhsE_ not modelled 15.0 33 PDB header:hydrolase/transcription regulator/protei Chain: E: PDB Molecule:saga-associated factor 73; PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde 32 c3h9mA_ not modelled 14.8 21 PDB header:lyase Chain: A: PDB Molecule:p-aminobenzoate synthetase, component i; PDBTitle: crystal structure of para-aminobenzoate synthetase,2 component i from cytophaga hutchinsonii 33 d2p6ra2 not modelled 14.6 26 Fold:Sec63 N-terminal domain-like Superfamily:Sec63 N-terminal domain-like Family:Achaeal helicase C-terminal domain 34 d1afsa_ not modelled 14.4 28 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 35 c2im5C_ not modelled 14.3 26 PDB header:transferase Chain: C: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of nicotinate phosphoribosyltransferase2 from porphyromonas gingivalis 36 d1at3a_ not modelled 14.0 19 Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin 37 c2f6nA_ not modelled 13.7 21 PDB header:transcription Chain: A: PDB Molecule:bromodomain phd finger transcription factor; PDBTitle: crystal structure of phd finger-linker-bromodomain fragment2 of human bptf in the free form 38 d2g0ta1 not modelled 13.7 24 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 39 d1us0a_ not modelled 13.3 38 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 40 c2i6yA_ not modelled 13.3 10 PDB header:lyase Chain: A: PDB Molecule:anthranilate synthase component i, putative; PDBTitle: structure and mechanism of mycobacterium tuberculosis salicylate2 synthase, mbti 41 c2fqxA_ not modelled 13.3 22 PDB header:transport protein Chain: A: PDB Molecule:membrane lipoprotein tmpc; PDBTitle: pnra from treponema pallidum complexed with guanosine 42 c2f7fA_ not modelled 13.3 25 PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase, putative; PDBTitle: crystal structure of enterococcus faecalis putative nicotinate2 phosphoribosyltransferase, new york structural genomics consortium 43 d2pbka1 not modelled 13.1 32 Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin 44 d1ubdc2 not modelled 13.0 38 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 45 c2l43A_ not modelled 12.7 19 PDB header:transcription Chain: A: PDB Molecule:n-teminal domain from histone h3.3, linker, phd1 domain PDBTitle: structural basis for histone code recognition by brpf2-phd1 finger 46 c2bs5A_ not modelled 12.5 47 PDB header:sugar binding protein Chain: A: PDB Molecule:fucose-binding lectin protein; PDBTitle: lectin from ralstonia solanacearum complexed with 2-2 fucosyllactose 47 d3efxd1 not modelled 12.4 43 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 48 d1vzva_ not modelled 12.4 21 Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin 49 d1vqow1 not modelled 12.4 13 Fold:Ribosomal protein L30p/L7e Superfamily:Ribosomal protein L30p/L7e Family:Ribosomal protein L30p/L7e 50 c3bu8B_ not modelled 11.8 16 PDB header:dna binding protein Chain: B: PDB Molecule:telomeric repeat-binding factor 2; PDBTitle: crystal structure of trf2 trfh domain and tin2 peptide2 complex 51 d1qdla_ not modelled 11.6 18 Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase 52 d1x3ha2 not modelled 11.3 36 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 53 c3pstA_ not modelled 11.1 17 PDB header:nuclear protein Chain: A: PDB Molecule:protein doa1; PDBTitle: crystal structure of pul and pfu(mutate) domain 54 d1xg8a_ not modelled 11.0 83 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:YuzD-like 55 d2olua1 not modelled 10.9 10 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:PBP transglycosylase domain-like 56 c3d6zA_ not modelled 10.6 33 PDB header:transcription regulator/dna Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator; PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine 57 c2euzA_ not modelled 10.6 50 PDB header:cell cycle/dna Chain: A: PDB Molecule:ndt80 protein; PDBTitle: structure of a ndt80-dna complex (mse mutant mc5t) 58 d1mnna_ not modelled 10.6 50 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding domain from NDT80 59 c3elfA_ not modelled 10.5 20 PDB header:lyase Chain: A: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: structural characterization of tetrameric mycobacterium tuberculosis2 fructose 1,6-bisphosphate aldolase - substrate binding and catalysis3 mechanism of a class iia bacterial aldolase 60 d1o6ea_ not modelled 10.0 29 Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin 61 d3chbd_ not modelled 10.0 44 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 62 c3ln3A_ not modelled 10.0 39 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution 63 c2krcA_ not modelled 9.6 43 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase 64 c2ysmA_ not modelled 9.5 23 PDB header:transferase Chain: A: PDB Molecule:myeloid/lymphoid or mixed-lineage leukemia PDBTitle: solution structure of the first and second phd domain from2 myeloid/lymphoid or mixed-lineage leukemia protein 33 homolog 65 c2w0tA_ not modelled 9.4 31 PDB header:transcription Chain: A: PDB Molecule:lethal(3)malignant brain tumor-like 2 protein; PDBTitle: solution structure of the fcs zinc finger domain of human2 lmbl2 66 c2l7pA_ not modelled 9.3 13 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase ashh2; PDBTitle: ashh2 a cw domain 67 c2a20A_ not modelled 9.3 26 PDB header:metal binding protein Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein PDBTitle: solution structure of rim2 zinc finger domain 68 c2e6rA_ not modelled 9.3 24 PDB header:dna binding protein Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; PDBTitle: solution structure of the phd domain in smcy protein 69 d1npba_ not modelled 9.0 31 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 70 c3os6A_ not modelled 9.0 17 PDB header:isomerase Chain: A: PDB Molecule:isochorismate synthase dhbc; PDBTitle: crystal structure of putative 2,3-dihydroxybenzoate-specific2 isochorismate synthase, dhbc from bacillus anthracis. 71 d1olma1 not modelled 8.7 20 Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain 72 d2af7a1 not modelled 8.6 16 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 73 d1kjna_ not modelled 8.4 29 Fold:Hypothetical protein MTH777 (MT0777) Superfamily:Hypothetical protein MTH777 (MT0777) Family:Hypothetical protein MTH777 (MT0777) 74 d2h1ta1 not modelled 8.3 27 Fold:Spiral beta-roll Superfamily:PA1994-like Family:PA1994-like 75 d1c8aa2 not modelled 8.2 35 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 76 d1l0nk_ not modelled 8.2 33 Fold:Single transmembrane helix Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 77 d1i8ta1 not modelled 8.0 31 Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:UDP-galactopyranose mutase, N-terminal domain 78 d2bv3a5 not modelled 7.9 17 Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V 79 c2wghA_ not modelled 7.9 24 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase large PDBTitle: human ribonucleotide reductase r1 subunit (rrm1) in complex2 with datp and mg. 80 d2ezla_ not modelled 7.8 36 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 81 c4a1cV_ not modelled 7.6 16 PDB header:ribosome Chain: V: PDB Molecule:60s ribosomal protein l7; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. 82 c2zkr2_ not modelled 7.6 60 PDB header:ribosomal protein/rna Chain: 2: PDB Molecule:60s ribosomal protein l37e; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 83 d2fyuk1 not modelled 7.6 39 Fold:Single transmembrane helix Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 84 c2cvuA_ not modelled 7.6 32 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase large chain PDBTitle: structures of yeast ribonucleotide reductase i 85 c3p5rB_ not modelled 7.4 23 PDB header:lyase Chain: B: PDB Molecule:taxadiene synthase; PDBTitle: crystal structure of taxadiene synthase from pacific yew (taxus2 brevifolia) in complex with mg2+ and 2-fluorogeranylgeranyl3 diphosphate 86 c3r1rB_ not modelled 7.4 28 PDB header:complex (oxidoreductase/peptide) Chain: B: PDB Molecule:ribonucleotide reductase r1 protein; PDBTitle: ribonucleotide reductase r1 protein with amppnp occupying2 the activity site from escherichia coli 87 c3jueA_ not modelled 7.4 32 PDB header:protein transport/endocytosis Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of arfgap and ank repeat domain of acap1 88 d2yt9a1 not modelled 7.3 63 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 89 c1s1iY_ not modelled 7.2 80 PDB header:ribosome Chain: Y: PDB Molecule:60s ribosomal protein l37-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 90 c3jywY_ not modelled 7.2 80 PDB header:ribosome Chain: Y: PDB Molecule:60s ribosomal protein l37(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution 91 c2olvA_ not modelled 7.1 9 PDB header:transferase Chain: A: PDB Molecule:penicillin-binding protein 2; PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex 92 d1b8da_ not modelled 7.1 28 Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins 93 c3fehA_ not modelled 7.1 38 PDB header:hydrolase activator Chain: A: PDB Molecule:centaurin-alpha-1; PDBTitle: crystal structure of full length centaurin alpha-1 94 c3k7bA_ not modelled 7.0 36 PDB header:viral protein Chain: A: PDB Molecule:protein a33; PDBTitle: the structure of the poxvirus a33 protein reveals a dimer of unique c-2 type lectin-like domains. 95 d1xp3a1 not modelled 6.9 22 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Endonuclease IV 96 d1mm2a_ not modelled 6.9 31 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain 97 d1bb8a_ not modelled 6.8 33 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:DNA-binding domain from tn916 integrase 98 d1zina2 not modelled 6.8 71 Fold:Rubredoxin-like Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain Family:Microbial and mitochondrial ADK, insert "zinc finger" domain 99 c1ybeA_ not modelled 6.7 23 PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase