Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1mnna_

Fold library idFoldSuperfamilyFamily
d1mnna_Common fold of diphtheria toxin/transcription factors/cytochrome fp53-like transcription factorsDNA-binding domain from NDT80


Added to library: Tue Mar 16 12:29:29 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VILTQLNEDGTTSNYFDKRKLKIAPRSTLQFKVGPPFELVRDYCPVVESHTGRTLDLRIIPRIDRGFDHI
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)


TTS


TTT



TT
GGGB






S
TTT

B


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DEEWVGYKRNYFTLVSTFETANCDLDTFLKSSFDLLVGRLRVQYFAIKIKAKNDDDDTEINLVQHTAKRD
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TTTTS

TT

S






TTT



TTGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KGPQFCPSVCPLVPSPLPKHQTIREASNVRNITKMKKYDSTFYLHRDHVNYEEYGVDSLLFSYPEDSIQK
Predicted secondary structure




























































SS confidence





































































Known secondary structure (DSSP) GS




B






TTT


GGGS
GGGS
TT
GGGGSSSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VARYERVQFASSISVKKPSQQNKHFSLHVILGAVVDPDGIPYDELALKNGSKGMFVYLQEMKTPPLIIRG
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) S
TT


B
TTS
B








SSSS
S

 .........290
Sequence RSPSNYASSQ
Predicted secondary structure









SS confidence









Known secondary structure (DSSP) S
GGGSGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D