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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2olvA_

Fold library idPDB HeaderMoleculeTitle
c2olvA_PDB header: transferaseChain: A: PDB Molecule: penicillin-binding protein 2;PDBTitle: structural insight into the transglycosylation step of2 bacterial cell wall biosynthesis : donor ligand complex


Added to library: Tue Mar 16 12:56:11 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKLQDPIPAKIYDKNGELVKTLDNGQRHEHVNLKDVPKSXKDAVLATEDNRFYEHGALDYKRLFGAIGKG
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Known secondary structure (DSSP)





B


TTS

STT
SB



STTS

TT
SS
SSS
ST

 .........80.........90.........100.........110.........120.........130.........140
Sequence ASTLTQQVVKDAFLSQHKSIGRKAQEAYLSYRLEQEYSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKD
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Known secondary structure (DSSP)


TTT

S

TTTS

B
STT
BS


 .........150.........160.........170.........180.........190.........200.........210
Sequence LKDLNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRKNTVLYLXHYHKRITDKQWEDAKKIDLKANLVNRTP
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Known secondary structure (DSSP) STT

GGGS
TTT
TTSS
TTS
TTTT




 .........220.........230.........240.........250.........260.........270.........280
Sequence EERQNIDTNQDSEYNSYVNFVKSELXNNKAFKDENLGNVLQSGIKIYTNXDKDVQKTLQNDVDNGSFYKN
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Known secondary structure (DSSP) S




TTGGGSSTTTTSS
TTBT
S





SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KDQQVGATILDSKTGGLVAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIENXKWATNHAIQDES
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Known secondary structure (DSSP) TTTTT
BSSTT

TTTS

TTSS

GGGGT


TTB

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence SYQVDGSTFRNYDTKSHGTVSIYDALRQSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEV
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Known secondary structure (DSSP)
SSS


SS
S


TT
T
TTTTT


SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence LGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDHTSHKAXSDYTAYXLAEXLKGTFK
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Known secondary structure (DSSP) TT
TT

TTS

B

TTS





S
GGGSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PYGSAYGHGVSGVNXGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTPQYTXSVWXGFSKVKQYGENSF
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Known secondary structure (DSSP) TTSTTTT


SS





TT

TTS
SSSS

GGGTTS
 .........570.........580.........590.........600.........610.......
Sequence VGHSQQEYPQFLYENVXSKISSRDGEDFKRPSSVSGSIPSINVSGSQDNNTTNRSTH
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Known secondary structure (DSSP) ST


S






SSTTTT


TTB






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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