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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2f6nA_

Fold library idPDB HeaderMoleculeTitle
c2f6nA_PDB header: transcriptionChain: A: PDB Molecule: bromodomain phd finger transcription factor;PDBTitle: crystal structure of phd finger-linker-bromodomain fragment2 of human bptf in the free form


Added to library: Tue Mar 16 13:55:15 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAXTVLTPLTEKDYEGL
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Known secondary structure (DSSP)

BTTTTB


TTS

TTT

TGGGT

T
S



TTTSB

 .........80.........90.........100.........110.........120.........130.........140
Sequence KRVLRSLQAHKXAWPFLEPVDPNDAPDYYGVIKEPXDLATXEERVQRRYYEKLTEFVADXTKIFDNCRYY
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Known secondary structure (DSSP) SGGGGGGSS


TTT
TT
SS


TT

SB
 .........150.........160......
Sequence NPSDSPFYQCAEVLESFFVQKLKGFK
Predicted secondary structure






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Known secondary structure (DSSP) S
TTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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