Email l.a.kelley@imperial.ac.uk Description P0A873 Date Thu Jan 5 11:07:04 GMT 2012 Unique Job ID 2ab663c291353529

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1uala_ 100.0 83 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 2 d1p9pa_ 100.0 100 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 3 c3ky7A_ 100.0 43 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: 2.35 angstrom resolution crystal structure of a putative trna2 (guanine-7-)-methyltransferase (trmd) from staphylococcus aureus3 subsp. aureus mrsa252 4 c3iefA_ 100.0 44 PDB header:transferase, rna binding protein Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna guanine-n1-methyltransferase from2 bartonella henselae using mpcs. 5 c3quvB_ 100.0 45 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a trna-guanine-n1-methyltransferase from2 mycobacterium abscessus 6 c1oy5B_ 100.0 41 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (m1g37) methyltransferase from aquifex2 aeolicus 7 d1oy5a_ 100.0 41 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 8 c3knuD_ 100.0 45 PDB header:transferase Chain: D: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (guanine-n1)-methyltransferase from2 anaplasma phagocytophilum 9 d1o6da_ 97.2 8 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 10 d1to0a_ 96.4 21 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 11 c2v3jA_ 96.3 14 PDB header:ribosomal protein Chain: A: PDB Molecule:essential for mitotic growth 1; PDBTitle: the yeast ribosome synthesis factor emg1 alpha beta knot2 fold methyltransferase 12 d1vh0a_ 96.2 22 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 13 d2v3ka1 96.1 14 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:EMG1/NEP1-like 14 d1ns5a_ 95.0 19 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YbeA-like 15 c3o7bA_ 78.5 18 PDB header:transferase Chain: A: PDB Molecule:ribosome biogenesis nep1 rna methyltransferase; PDBTitle: crystal structure of archaeoglobus fulgidus nep1 bound to s-2 adenosylhomocysteine 16 c3ai9X_ 46.1 24 PDB header:transferase Chain: X: PDB Molecule:upf0217 protein mj1640; PDBTitle: crystal structure of duf358 protein reveals a putative spout-class2 rrna methyltransferase 17 d3d3ra1 44.2 38 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 18 c3d3rA_ 43.1 38 PDB header:chaperone Chain: A: PDB Molecule:hydrogenase assembly chaperone hypc/hupf; PDBTitle: crystal structure of the hydrogenase assembly chaperone hypc/hupf2 family protein from shewanella oneidensis mr-1 19 d2ot2a1 29.4 27 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 20 d1dj3a_ 28.8 19 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 21 d1dj2a_ not modelled 27.4 22 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 22 d2qmma1 not modelled 25.8 24 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:AF1056-like 23 c1zmrA_ not modelled 24.8 24 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of the e. coli phosphoglycerate kinase 24 c1zosE_ not modelled 23.9 21 PDB header:hydrolase Chain: E: PDB Molecule:5'-methylthioadenosine / s-adenosylhomocysteine PDBTitle: structure of 5'-methylthionadenosine/s-adenosylhomocysteine2 nucleosidase from s. pneumoniae with a transition-state3 inhibitor mt-imma 25 d2z1ca1 not modelled 21.6 22 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 26 d1sqsa_ not modelled 21.1 9 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Hypothetical protein SP1951 27 d2z1aa2 not modelled 20.3 23 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 28 c1xi4O_ not modelled 19.2 22 PDB header:endocytosis/exocytosis Chain: O: PDB Molecule:clathrin light chain a; PDBTitle: clathrin d6 coat 29 c1rcuB_ not modelled 18.9 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein vt76; PDBTitle: x-ray structure of tm1055 northeast structural genomics2 consortium target vt76 30 d1rcua_ not modelled 18.9 22 Fold:MCP/YpsA-like Superfamily:MCP/YpsA-like Family:MoCo carrier protein-like 31 d1vjda_ not modelled 18.0 27 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 32 d3bbda1 not modelled 17.2 15 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:EMG1/NEP1-like 33 c1zggA_ not modelled 16.5 17 PDB header:hydrolase Chain: A: PDB Molecule:putative low molecular weight protein-tyrosine- PDBTitle: solution structure of a low molecular weight protein2 tyrosine phosphatase from bacillus subtilis 34 c3dcmX_ not modelled 16.3 22 PDB header:transferase Chain: X: PDB Molecule:uncharacterized protein tm_1570; PDBTitle: crystal structure of the thermotoga maritima spout family2 rna-methyltransferase protein tm1570 in complex with s-3 adenosyl-l-methionine 35 d1qf5a_ not modelled 15.7 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 36 d1jysa_ not modelled 15.1 24 Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases 37 c2ky8A_ not modelled 14.9 55 PDB header:transcription/dna Chain: A: PDB Molecule:methyl-cpg-binding domain protein 2; PDBTitle: solution structure and dynamic analysis of chicken mbd2 methyl binding2 domain bound to a target methylated dna sequence 38 c2cunA_ not modelled 14.4 16 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of phosphoglycerate kinase from pyrococcus2 horikoshii ot3 39 d1fdja_ not modelled 14.1 15 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 40 c1w4zA_ not modelled 13.6 13 PDB header:antibiotic biosynthesis Chain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase 41 d16pka_ not modelled 13.4 26 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 42 d1prtf_ not modelled 13.0 33 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 43 d1vpea_ not modelled 12.6 23 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 44 c3r7tA_ not modelled 12.6 17 PDB header:ligase Chain: A: PDB Molecule:adenylosuccinate synthetase; PDBTitle: crystal structure of adenylosuccinate synthetase from campylobacter2 jejuni 45 d3dl3a1 not modelled 12.6 17 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TehB-like 46 d1m2ka_ not modelled 12.2 20 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Sir2 family of transcriptional regulators 47 d1gsaa1 not modelled 12.2 15 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Prokaryotic glutathione synthetase, N-terminal domain 48 d1v6sa_ not modelled 11.8 20 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 49 d3bb6a1 not modelled 11.6 8 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TehB-like 50 d1hdia_ not modelled 11.5 26 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 51 d1pj3a1 not modelled 11.4 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 52 d1ig4a_ not modelled 11.1 29 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 53 d1ltka_ not modelled 10.8 26 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 54 d1phpa_ not modelled 10.7 31 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 55 d2qwva1 not modelled 10.6 18 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:AF1056-like 56 d2fvka1 not modelled 10.3 25 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase) 57 c2yvaB_ not modelled 10.1 17 PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa 58 d2o3aa1 not modelled 9.8 25 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:AF0751-like 59 d1ddza2 not modelled 9.3 56 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 60 d1qk9a_ not modelled 9.2 36 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 61 c2k1lB_ not modelled 9.2 45 PDB header:signaling protein Chain: B: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3 62 c2k1kA_ not modelled 9.2 45 PDB header:signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3 63 c2k1kB_ not modelled 9.2 45 PDB header:signaling protein Chain: B: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3 64 c2k1lA_ not modelled 9.2 45 PDB header:signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3 65 c3lf2B_ not modelled 9.1 18 PDB header:oxidoreductase Chain: B: PDB Molecule:short chain oxidoreductase q9hya2; PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center 66 c3ff4A_ not modelled 9.0 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein chu_1412 67 c1gshA_ not modelled 8.9 15 PDB header:glutathione biosynthesis ligase Chain: A: PDB Molecule:glutathione biosynthetic ligase; PDBTitle: structure of escherichia coli glutathione synthetase at ph 7.5 68 d1ddza1 not modelled 8.9 78 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 69 d1ub1a_ not modelled 8.8 36 Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD 70 c3ue9A_ not modelled 8.8 18 PDB header:ligase Chain: A: PDB Molecule:adenylosuccinate synthetase; PDBTitle: crystal structure of adenylosuccinate synthetase (ampsase) (pura) from2 burkholderia thailandensis 71 c2yh5A_ not modelled 8.7 21 PDB header:lipid binding protein Chain: A: PDB Molecule:dapx protein; PDBTitle: structure of the c-terminal domain of bamc 72 c3majA_ not modelled 8.7 24 PDB header:dna binding protein Chain: A: PDB Molecule:dna processing chain a; PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009 73 c3q3vA_ not modelled 8.6 33 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni. 74 c1ddzA_ not modelled 8.3 78 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase; PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1 75 c3eh0C_ not modelled 8.1 22 PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n- PDBTitle: crystal structure of lpxd from escherichia coli 76 c3lasA_ not modelled 8.1 22 PDB header:lyase Chain: A: PDB Molecule:putative carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution 77 d2cqaa1 not modelled 8.0 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TIP49 domain 78 d2qmwa1 not modelled 8.0 10 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 79 d2rhca1 not modelled 8.0 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 80 d1a5ca_ not modelled 8.0 19 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 81 d3c2wa2 not modelled 7.8 13 Fold:Profilin-like Superfamily:GAF domain-like Family:Phytochrome-specific domain 82 d2dsma1 not modelled 7.7 43 Fold:YqaI-like Superfamily:YqaI-like Family:YqaI-like 83 c3eyxB_ not modelled 7.6 22 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae 84 d2a9va1 not modelled 7.6 8 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 85 d2do3a1 not modelled 7.5 26 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:SPT5 KOW domain-like 86 c2q2qG_ not modelled 7.5 14 PDB header:oxidoreductase Chain: G: PDB Molecule:beta-d-hydroxybutyrate dehydrogenase; PDBTitle: structure of d-3-hydroxybutyrate dehydrogenase from pseudomonas putida 87 d1xfba1 not modelled 7.5 19 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 88 d2fr1a1 not modelled 7.5 7 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 89 c3nkdB_ not modelled 7.4 29 PDB header:immune system Chain: B: PDB Molecule:crispr-associated protein cas1; PDBTitle: structure of crisp-associated protein cas1 from escherichia coli str.2 k-12 90 c2iz6A_ not modelled 7.3 18 PDB header:metal transport Chain: A: PDB Molecule:molybdenum cofactor carrier protein; PDBTitle: structure of the chlamydomonas rheinhardtii moco carrier2 protein 91 c2pc4B_ not modelled 7.3 19 PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: crystal structure of fructose-bisphosphate aldolase from plasmodium2 falciparum in complex with trap-tail determined at 2.4 angstrom3 resolution 92 d2pw6a1 not modelled 7.1 9 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 93 d1gxha_ not modelled 7.1 40 Fold:Acyl carrier protein-like Superfamily:Colicin E immunity proteins Family:Colicin E immunity proteins 94 c2d7uA_ not modelled 7.1 11 PDB header:ligase Chain: A: PDB Molecule:adenylosuccinate synthetase; PDBTitle: crystal structure of hypothetical adenylosuccinate synthetase, ph04382 from pyrococcus horikoshii ot3 95 c3ggsA_ not modelled 7.0 26 PDB header:transferase Chain: A: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: human purine nucleoside phosphorylase double mutant e201q,n243d2 complexed with 2-fluoro-2'-deoxyadenosine 96 c2ph3B_ not modelled 6.9 18 PDB header:oxidoreductase Chain: B: PDB Molecule:3-oxoacyl-[acyl carrier protein] reductase; PDBTitle: crystal structure of 3-oxoacyl-[acyl carrier protein] reductase2 ttha0415 from thermus thermophilus 97 d2vlqa1 not modelled 6.8 20 Fold:Acyl carrier protein-like Superfamily:Colicin E immunity proteins Family:Colicin E immunity proteins 98 d1zaia1 not modelled 6.8 19 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 99 d1v2xa_ not modelled 6.8 15 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:SpoU-like RNA 2'-O ribose methyltransferase