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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1qk9a_ | DNA-binding domain | DNA-binding domain | Methyl-CpG-binding domain, MBD |
Added to library: Tue Mar 16 14:40:35 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | S | A | S | P | K | Q | R | R | S | I | I | R | D | R | G | P | M | Y | D | D | P | T | L | P | E | G | W | T | R | K | L | K | Q | R | K | S | G | R | S | A | G | K | Y | D | V | Y | L | I | N | P | Q | G | K | A | F | R | S | K | V | E | L | I | A | Y | F | E | K | V | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | B | S | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | ||
Sequence | D | T | S | L | D | P | N | D | F | D | F | T | V | T | G | R | G | S | G | S | G | C | ||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | G | G | G | T | T | S | S |
Download: | PDB structure | FASTA sequence |
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