PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3lf2B_

Fold library id	PDB Header	Molecule	Title
c3lf2B_	PDB header: oxidoreductase	Chain: B: PDB Molecule: short chain oxidoreductase q9hya2;	PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center

Links to external resources
Added to library: Sat Aug 28 17:04:59 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P Y D L S E A V A V V T G G S S G I G L A T V E L L L E A G A A V A F C A R D G E R L R A A E S A L R Q R F P G A R L F A S V C D V L D A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S S T T
S
S T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q V R A F A E A C E R T L G C A S I L V N N A G Q G R V S T F A E T T D E A W S E E L Q L K F F S V I H P V R A F L P Q L E S R A D A A I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
B
S T T
T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C V N S L L A S Q P E P H M V A T S A A R A G V K N L V R S M A F E F A P K G V R V N G I L I G L V E S G Q W R R R F E A R E E R E L D W A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T S
T T B G G G T
S B
S T
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . .

Sequence Q W T A Q L A R N K Q I P L G R L G K P I E A A R A I L F L A S P L S A Y T T G S H I D V S G G L S R H A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S
B
S G G G T T
S
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	Y	D	L	S	E	A	V	A	V	V	T	G	G	S	S	G	I	G	L	A	T	V	E	L	L	L	E	A	G	A	A	V	A	F	C	A	R	D	G	E	R	L	R	A	A	E	S	A	L	R	Q	R	F	P	G	A	R	L	F	A	S	V	C	D	V	L	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T							S		S	S													T	T								S																S	T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	V	R	A	F	A	E	A	C	E	R	T	L	G	C	A	S	I	L	V	N	N	A	G	Q	G	R	V	S	T	F	A	E	T	T	D	E	A	W	S	E	E	L	Q	L	K	F	F	S	V	I	H	P	V	R	A	F	L	P	Q	L	E	S	R	A	D	A	A	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S		S												B		S	T	T																													T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	V	N	S	L	L	A	S	Q	P	E	P	H	M	V	A	T	S	A	A	R	A	G	V	K	N	L	V	R	S	M	A	F	E	F	A	P	K	G	V	R	V	N	G	I	L	I	G	L	V	E	S	G	Q	W	R	R	R	F	E	A	R	E	E	R	E	L	D	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T	S			T	T	B																						G	G	G	T										S	B		S									T		S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Sequence	Q	W	T	A	Q	L	A	R	N	K	Q	I	P	L	G	R	L	G	K	P	I	E	A	A	R	A	I	L	F	L	A	S	P	L	S	A	Y	T	T	G	S	H	I	D	V	S	G	G	L	S	R	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		T	T	S	S		B														S	G	G	G	T	T			S						S	S	S