Fold library entry viewer: d16pka_

Added to library: Tue Mar 16 13:33:41 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	K	K	S	I	N	E	C	D	L	K	G	K	K	V	L	I	R	V	D	F	N	V	P	V	K	N	G	K	I	T	N	D	Y	R	I	R	S	A	L	P	T	L	K	K	V	L	T	E	G	G	S	C	V	L	M	S	H	L	G	R	P	K	G	I	P	M	A	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		B	G	G	G	S			T	T															T	T			S																		T	T										S					B		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	I	R	S	T	G	G	V	P	G	F	Q	Q	K	A	T	L	K	P	V	A	K	R	L	S	E	L	L	L	R	P	V	T	F	A	P	D	C	L	N	A	A	D	V	V	S	K	M	S	P	G	D	V	V	L	L	E	N	V	R	F	Y	K	E	E	G	S	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			T	T			G	G	G		S												T	S						S		T	T	S							T			T	T								G	G	G	B	G	G	G	G		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	D	R	E	A	M	A	K	I	L	A	S	Y	G	D	V	Y	I	S	D	A	F	G	T	A	H	R	D	S	A	T	M	T	G	I	P	K	I	L	G	N	G	A	A	G	Y	L	M	E	K	E	I	S	Y	F	A	K	V	L	G	N	P	P	R	P	L	V	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S							G	G	G	T	T	S			T	T	T	T							T																				S				S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	G	G	A	K	V	S	D	K	I	Q	L	L	D	N	M	L	Q	R	I	D	Y	L	L	I	G	G	A	M	A	Y	T	F	L	K	A	Q	G	Y	S	I	G	K	S	K	C	E	E	S	K	L	E	F	A	R	S	L	L	K	K	A	E	D	R	K	V	Q	V	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	G	G	G								G	G	G		S						T	T										T				T	T					G	G	G														T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	I	D	H	V	C	H	T	E	F	K	A	V	D	S	P	L	I	T	E	D	Q	N	I	P	E	G	H	M	A	L	D	I	G	P	K	T	I	E	K	Y	V	Q	T	I	G	K	C	K	S	A	I	W	N	G	P	M	G	V	F	E	M	V	P	Y	S	K	G	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S					S	S	S	S			S	S					S	S	S				T	T																			T	T		S						S		S	S		T	T	S	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Sequence	A	I	A	K	A	M	G	R	G	T	H	E	H	G	L	M	S	I	I	G	G	G	D	S	A	S	A	A	E	L	S	G	E	A	K	R	M	S	H	V	S	T	G	G	G	A	S	L	E	L	L	E	G	K	T	L	P	G	V	T	V	L	D	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S										T	T		T	T	T	S	S				S										T	T								T	S		B

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PDB structure

FASTA sequence

Hidden Markov model

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