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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3majA_

Fold library idPDB HeaderMoleculeTitle
c3majA_PDB header: dna binding proteinChain: A: PDB Molecule: dna processing chain a;PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009


Added to library: Sat Aug 28 19:38:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GTTVLTEAQRIDWXRLIRAENVGPRTFRSLINHFGSARAALERLPELARRGGAARAGRIPSEDEARREIE
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Known secondary structure (DSSP)



S
TSTT

SST
SS





 .........80.........90.........100.........110.........120.........130.........140
Sequence AGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVXARPXIAIVGSRNASGAGLKFAGQLAAD
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Known secondary structure (DSSP) TTT
TTSTTS
TSTT

SS

TT
GGGGGS


SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence LGAAGFVVISGLARGIDQAAHRASLSSGTVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEXPLGHVPR
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Known secondary structure (DSSP) T



TTTTT

SS
TTS
SSGGGTT

S
TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence GKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLIT
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Known secondary structure (DSSP) TT
S




TT
TT





TT
GGGTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SASDIVEAVASILEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSL
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Known secondary structure (DSSP) STTT





TT

SS



TT


TTS
 ...
Sequence VSL
Predicted secondary structure
SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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