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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2023 Jun 03

Fold library idPDB HeaderMoleculeTitle
c8iw7R_ 2.97 membrane protein Chain: R: trace amine-associated receptor 9;
c7xqaE_ 1.93 oxidoreductase Chain: E: n-formimidoyl fortimicin a synthase;
c7yk3C_ 2.20 toxin Chain: C: dna adp-ribosyl transferase;
c7zvwA_ 3.40 transcription Chain: A: transcription-associated protein;
c8i3fB_ 1.62 structural protein Chain: B: rco1 isoform 1;
c7zxnA_ 3.06 membrane protein Chain: A: gap junction beta-1 protein;
c8a7rB_ 2.00 biosynthetic protein Chain: B: isoprenyl diphosphate synthase;
c7xz3A_ 1.89 transferase Chain: A: crispr-associated protein, csh2 family;
c8hfaD_ 2.64 hydrolase Chain: D: nodb homology domain-containing protein;
c8c0zA_ 3.22 oxidoreductase Chain: A: aldehyde:ferredoxin oxidoreductase,tungsten-containing;
c8focB_ 3.70 dna binding protein Chain: B: dna primase large subunit;
c8a53A_ 1.95 hydrolase Chain: A: metacaspase-9;
c7uwhC_ 3.10 transferase/hydrolase/dna/rna Chain: C: ribonuclease hii;
c8ievB_ 2.08 unknown function Chain: B: duf2891 domain-containing protein;
c8fbuA_ UNK Blank PDB header PDB COMPND:
c8h9jQ_ 3.26 membrane protein Chain: Q: atp synthase protein 8;
c8if8B_ 3.10 membrane protein Chain: B: galactan 5-o-arabinofuranosyltransferase;
c7ypvF_ 2.42 transferase Chain: F: acetyltransferase;
c7zvwH_ 3.40 transcription Chain: H: chromatin modification-related protein eaf1;
c7ynkB_ 3.48 protein transport Chain: B: pdzk1-interacting protein 1;
c8b6vF_ UNK Blank PDB header PDB COMPND:
c7w1mH_ 6.50 dna binding protein/dna Chain: H: transcriptional repressor ctcf;
c8ecmA_ UNK Blank PDB header PDB COMPND:
c8ovlA_ UNK metal binding protein Chain: A: copper-translocating p-type atpase;
c8et9A_ 3.61 transport protein Chain: A: oct2;
c7zvwE_ 3.40 transcription Chain: E: chromatin modification-related protein eaf1;
c7ylzA_ 2.72 ligase Chain: A: hydroxyamidotransferase;
c8b9yC_ 1.80 transferase Chain: C: cysteine synthase, putative;
c8swdA_ 2.45 oxidoreductase Chain: A: 2-oxoglutarate:acceptor oxidoreductase;
c8ceiC_ 2.20 oxidoreductase Chain: C: succinate-semialdehyde dehydrogenase (acetylating);
c8foj1_ 4.80 dna binding protein Chain: 1: dna polymerase;
c8c0zE_ 3.22 oxidoreductase Chain: E: similar to ferredoxin:nadh oxidoreductases or nadh
c8b6aB_ 1.77 unknown function Chain: B: conserved hypothetical lipoprotein;
c8hf9A_ 1.96 hydrolase Chain: A: chitin deacetylase;
c8dveA_ UNK Blank PDB header PDB COMPND:
c7xx7U_ 2.70 dna binding protein/dna Chain: U: histone h1.10;
c8i3gD_ 2.40 structural protein Chain: D: chromatin modification-related protein eaf7;
c8ee0A_ 2.65 biosynthetic protein, transferase/immune Chain: A: 6-deoxyerythronolide b synthase;
c7xmwA_ 2.59 antiviral protein Chain: A: acrvia2;
c8of9A_ 3.11 hydrolase Chain: A: tem-1 beta-lactamase;
c7yibA_ 2.18 hydrolase Chain: A: cd-ntase-associated protein 4;
c8hi4B_ 3.35 oxidoreductase Chain: B: short-chain dehydrogenase/reductase sdr;
c7xliB_ 1.70 metal transport Chain: B: vhh6 nanobody;
c8bb6A_ 2.68 membrane protein Chain: A: sucrose transport protein suc1;
c7xjvC_ 2.80 transferase Chain: C: alpha-1,3-mannosyltransferase mnt2;
c8odqD_ 1.65 transferase Chain: D: cysteine desulfurase;
c8foeB_ 5.60 dna binding protein Chain: B: dna primase large subunit;
c8oekA_ 2.22 signaling protein Chain: A: adhesion g protein-coupled receptor b2;
c7ynjB_ 3.33 protein transport Chain: B: pdzk1-interacting protein 1;
c7zvwC_ 3.40 transcription Chain: C: enhancer of polycomb-like protein;
c8du5A_ 3.50 hydrolase Chain: A: sialidase-1;
c8gppC_ 2.09 carbohydrate Chain: C: carbonic anhydrase;
c8odqA_ 1.65 transferase Chain: A: nitrogen fixation protein;
c7yniB_ 3.50 protein transport Chain: B: pdzk1-interacting protein 1;
c8c0zF_ 3.22 oxidoreductase Chain: F: iron-sulfur cluster-binding protein potential subunit of
c8i3gA_ 2.40 structural protein Chain: A: chromatin modification-related protein eaf3;
c8b61A_ 1.81 unknown function Chain: A: conserved hypothetical lipoprotein;
c8ahkA_ UNK plant protein Chain: A: ag41;
c8odwA_ 3.07 biosynthetic protein Chain: A: polyketide synthase modules-related protein;
c8in9B_ 3.40 lyase Chain: B: polyketide synthase;
c7yk3B_ 2.20 toxin Chain: B: dna adp-ribosyl glycohydrolase;
c7xlzB_ 1.19 oxidoreductase Chain: B: siderophore-interacting protein;
c7ylgA_ 1.80 immune system Chain: A: toll-like receptor 2;
c7xwoB_ 2.70 membrane protein Chain: B: soluble cytochrome b562,substance-k receptor;
c8c6zA_ 1.85 hydrolase Chain: A: chitinase b;
c8iw9R_ 3.08 membrane protein Chain: R: trace amine-associated receptor 9;
c8foe1_ 5.60 dna binding protein Chain: 1: dna polymerase;
c8fod1_ 3.80 dna binding protein Chain: 1: dna polymerase;
c7zw4B_ 2.72 structural protein Chain: B: caskin-2;
c8firA_ 1.95 transferase Chain: A: phosphate acetyltransferase;
c8h9vQ_ 3.02 membrane protein Chain: Q: atp synthase protein 8;
c8g21A_ UNK sugar binding protein Chain: A: reelin;
c7zvwF_ 3.40 transcription Chain: F: swr1-complex protein 4;
c8opzA_ UNK Blank PDB header PDB COMPND:
c8fojA_ 4.80 dna binding protein Chain: A: dna primase;
c7xwuB_ 2.00 oxidoreductase Chain: B: epimerase domain-containing protein;
c7zvwG_ 3.40 transcription Chain: G: actin;
c7ynkA_ 3.48 protein transport Chain: A: sodium/glucose cotransporter 2;
c8oq0A_ 2.59 viral protein Chain: A: tailspike protein;
c8foh1_ 4.93 dna binding protein Chain: 1: dna polymerase;
c8b6uA_ 2.13 toxin Chain: A: mpf2ba1;
c8hkcE_ 2.49 transcription/dna Chain: E: rna polymerase sigma factor rpoh;
c8i3gC_ 2.40 structural protein Chain: C: chromatin modification-related protein eaf7;
c7zwaC_ 2.80 dna binding protein Chain: C: protein paxx;


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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