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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8du5A_

Fold library idPDB HeaderMoleculeTitle
c8du5A_3.50PDB header: hydrolaseChain: A: PDB Molecule: sialidase-1;


Added to library: Sat Jun 3 16:45:30 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DFSLVQPLVTMEQLLWVSGKQIGSVDTFRIPLITATPRGTLLAFAEARKKSASDEGAKFIAMRRSTDQGS
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Known secondary structure (DSSP)

TT


TTS
BTTB

TTS

TTT

S
BSSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TWSSTAFIVDDGEASDGLNLGAVVNDVDTGIVFLIYTLCAHKVNCQVASTMLVWSKDDGISWSPPRNLSV
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Known secondary structure (DSSP) S





SSSS

TTT

TTT
SS
SS
SSSSSS



T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DIGTEMFAPGPGSGIQKQREPGKGRLIVCGHGTLERDGVFCLLSDDHGASWHYGTGVSGIPFGQPKHDHD
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Known secondary structure (DSSP)
SS

S


SSSSTT

GGG
SSTTS





SSTTS


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FNPDECQPYELPDGSVIINARNQNNYHCRCRIVLRSYDACDTLRPRDVTFDPELVDPVVAAGALATSSGI
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Known secondary structure (DSSP)


TTS
TT

SSSSSTTS


GGG

SS



TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VFFSNPAHPEFRVNLTLRWSFSNGTSWQKERVQVWPGPSGYSSLTALENSTDGKKQPPQLFVLYEKGLNR
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Known secondary structure (DSSP)

SSSSSSTTSS

S
SSBTTB
S



SS
 .........360......
Sequence YTESISMVKISVYGTL
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Known secondary structure (DSSP) GGGTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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