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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8opzA_

Fold library idPDB HeaderMoleculeTitle
c8opzA_UNKPDB header: Blank PDB headerPDB COMPND:


Added to library: Sat Jun 3 16:38:53 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QYYLKYFNPDIVYPKNARIMLDTGVVVMSMVDGNSTNPNSNMTGWVRVNSASLIFDQSGKTQQEINDSQK
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Known secondary structure (DSSP)




B

TT

B
TT

TTS
SSSSB


TTT

TTTT
GGG
B
TTS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence QKLPSLKDYGAVSGQDSTAAIKAAIAAEDFLYFGDIGDNFIVSEQIDLRDGCYYVSNGAKFTAALGIEGS
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Known secondary structure (DSSP) S
BTGGGT

BTSB

STT
SS


TT

TTTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence QPYTPKSIINASGKVGINISGLVRTHIDHNIFSALGDANSKPTISGFLADAAIDCDFGKWESVGSVNYYY
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Known secondary structure (DSSP) SS



TT
BS


GGGTTTSS
SS



S
BS


B



 .........220.........230.........240.........250.........260.........270.........280
Sequence TPNFKEYGIVDLRNSIDCYIEADVNGRWTEETTASTPSTVGIMGSNNKGCYLKGRAKNCYWSGILWEGED
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Known secondary structure (DSSP) SSS




SS
BS


BTTB

SS




SS
SS
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence CVVDGPHVRNTKGSNLNLAGKNTAAYNVDLYGSEQGNISIGEGATQAENCNVVGGVAGNAKFANCHLHSV
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Known secondary structure (DSSP)
S
SS
SS
SS
SSTT
S
S
SS
S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TKNCHVKLFHYGWGQTASAVSDATSGIRCQGTGNTIDSEFDVTYGGLTVKGDAVNVYCSTLTNPEATNIK
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Known secondary structure (DSSP) S





SSS


TTS
S
S
TTGGG



S
S
S
SSS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VNVVGIGARVQIRAPYTIVNAKITGATGDAVVLGERCKGSIVEEVTAIKCGRPLQYAPKTTDANDYAGVI
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Known secondary structure (DSSP) S

STT
S
SS
TT
TT
S
S


TT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence IGRINDVECTNRSVFYGQKIVHSQRKIERIYAQETAFVLDQVLEAIEVYTNDSGVTGANKLASAIRHISA
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Known secondary structure (DSSP) S
SS

B

S
















S


TT



TT

SS


 .........570.........580.........590.........600.........610.........620.........630
Sequence DSFGTSYGLDLVASTISKNNLANSKTKVRAGHIEVEPAVAGAASHIVLYAANGTKWKLEPTGSASAANWV
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Known secondary structure (DSSP) SSSSS
TTTT

SSTT




TTS



SSS




 ..
Sequence AV
Predicted secondary structure
SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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