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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2018 Sep 08

Fold library idPDB HeaderMoleculeTitle
c6h45B_ 2.40 transferase Chain: B: queuine trna-ribosyltransferase catalytic subunit 1;
c6h9nB_ 2.60 cell cycle Chain: B: cell division protein ftsb;
c5zw2A_ 1.80 biosynthetic protein Chain: A: l-prolyl-[peptidyl-carrier protein] dehydrogenase;
c6dvyC_ 4.00 membrane protein Chain: C: transient receptor potential cation channel subfamily v
c6csmC_ 2.90 membrane protein Chain: C: gtacr1;
c5zvvA_ 2.20 transcription regulator Chain: A: aimr transcriptional regulator;
c6et6A_ 1.20 antimicrobial protein Chain: A: lysozyme;
c6c0yA_ 1.66 biosynthetic protein Chain: A: lysinoalanine synthase;
c6efwA_ 1.90 lyase Chain: A: atp-dependent (s)-nad(p)h-hydrate dehydratase;
c6fq1A_ 1.31 rna binding protein Chain: A: insulin-like growth factor 2 mrna-binding protein 3;
c6gaqB_ 2.50 electron transport Chain: B: flavodoxin;
c6fesC_ 3.00 de novo protein Chain: C: d12_bric2, a synthetic protein,d12_bric2, a synthetic
c6gc1A_ 2.70 unknown function Chain: A: nhl repeat-containing protein 2;
c6gs2B_ 2.04 biosynthetic protein Chain: B: sa1708 protein;
c6maiA_ 1.80 hydrolase Chain: A: deoxyuridine 5'-triphosphate nucleotidohydrolase;
c6el3A_ 1.90 oxidoreductase Chain: A: 3-oxo-delta(4,5)-steroid 5-beta-reductase;
c5z1vB_ 1.66 unknown function Chain: B: avrpib protein;
c6garB_ 2.40 oxidoreductase Chain: B: ferredoxin--nadp reductase;
c5ykaA_ 1.45 biosynthetic protein Chain: A: uncharacterized protein kdoo;
c6dcfC_ 3.45 transcription/dna/antibiotic Chain: C: dna-directed rna polymerase subunit beta;
c6h1bA_ 2.80 ligase Chain: A: fatty acid coa ligase;
c6bduA_ 2.00 dna binding protein Chain: A: dna repair protein ppra;
c6cxoB_ 2.20 immune system Chain: B: complement component c9;
c6damA_ 1.85 oxidoreductase Chain: A: lanthanide-dependent methanol dehydrogenase xoxf;
c6bx3N_ 4.30 gene regulation/transferase Chain: N: compass component sdc1;
c6dcfD_ 3.45 transcription/dna/antibiotic Chain: D: dna-directed rna polymerase subunit beta';
c6c57B_ 3.50 transferase/transferase inhibitor Chain: B: geranylgeranyl pyrophosphate synthase;
c6gmlA_ 3.20 transcription Chain: A: dna-directed rna polymerase subunit;
c6fy2P_ 2.30 immune system Chain: P: cap225 scaffolded v1v2;
c5v1uB_ 2.05 protein binding Chain: B: tbib1;
c6efeA_ UNK toxin Chain: A: kappa-conotoxin vil14a;
c6bx3E_ 4.30 gene regulation/transferase Chain: E: histone-lysine n-methyltransferase, h3 lysine-4 specific;
c6gmlV_ 3.20 transcription Chain: V: negative elongation factor b;
c5owvC_ 3.72 lipid binding protein Chain: C: gtp-binding protein;
c6ff6A_ 2.50 de novo protein Chain: A: bric1;
c6h9oB_ 2.80 cell cycle Chain: B: cell division protein ftsb;
c6gmlW_ 3.20 transcription Chain: W: negative elongation factor c/d;
c6bx3F_ 4.30 gene regulation/transferase Chain: F: compass component spp1;
c6e8wC_ UNK viral protein Chain: C: envelope glycoprotein gp160;
c6bx3A_ 4.30 gene regulation/transferase Chain: A: compass component swd3;
c6bx3B_ 4.30 gene regulation/transferase Chain: B: compass component swd1;
c6h9oD_ 2.80 cell cycle Chain: D: cell division protein ftsb;
c5oxfB_ 3.94 lipid binding protein Chain: B: gtp-binding protein;
c6bzsA_ 2.30 transport protein Chain: A: multidrug resistance-associated protein 6;
c5os9A_ 1.80 dna binding protein Chain: A: b3 domain-containing transcription factor nga1;
c6fy2Z_ 2.30 immune system Chain: Z: cap225 scaffolded v1v2;
c5z70B_ 2.91 hydrolase Chain: B: oleate hydratase;
c5owvA_ 3.72 lipid binding protein Chain: A: gtp-binding protein;
c6bx3K_ 4.30 gene regulation/transferase Chain: K: compass component bre2;


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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