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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6dvyC_

Fold library idPDB HeaderMoleculeTitle
c6dvyC_4.00PDB header: membrane proteinChain: C: PDB Molecule: transient receptor potential cation channel subfamily v


Added to library: Sat Sep 8 08:51:24 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKKRLKKRIFAAVSEGCVEELRELLQDLQDLCRRRRGLDVPDFLMHKLTASDTGKTCLMKALLNINPNTK
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Known secondary structure (DSSP)


TTT
SS

SSTTSB
SSS

BS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EIVRILLAFAEENDILDRFINAEYTEEAYEGQTALNIAIERRQGDITAVLIAAGADVNAHAKGVFFNPKY
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Known secondary structure (DSSP) TT
T



SGGGTT

TT
TT

TT



STTS
SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence QHEGFYFGETPLALAACTNQPEIVQLLMENEQTDITSQDSRGNNILHALVTVAEDFKTQNDFVKRMYDMI
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Known secondary structure (DSSP) TTT




S
TT
TTSTT

TT


TT


TT

SSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLRSGNWELETMRNNDGLTPLQLAAKMGKAEILKYILSREIKEKPLRSLSRKFTDWAYGPVSSSLYDLTN
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Known secondary structure (DSSP) S

STTTS


SS


TT





SSSGGG
STT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VDTTTDNSVLEIIVYNTNIDNRHEMLTLEPLHTLLHTKWKKFAKYMFFLSFCFYFFYNITLTLVSYYRPR
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Known secondary structure (DSSP) TSTTSTT
TS

S
S
STSTT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EDEDLPHPLALTHKMSWLQLLGRMFVLIWATCISVKEGIAIFLLRPSDLQSILSDAWFHFVFFVQAVLVI
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Known secondary structure (DSSP) S
SSS

TT


S


TTTS
SSSSSSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LSVFLYLFAYKEYLACLVLAMALGWANMLYYTRGFQSMGMYSVMIQKVILHDVLKFLFVYILFLLGFGVA
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Known secondary structure (DSSP) TTT
STTTGGGGGG
SSTTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LASLIEKCSKDKKDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSTYPILFLFLLITYVILTFVLLLNMLI
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Known secondary structure (DSSP) TTTTTTS

SS
S
S
S
STTTT


STT


SST
 .........570.........580.........590.........600.........610.........620.........630
Sequence ALMGETVENVSKESERIWRLQRARTILEFEKMLPEWLRSRFRMGELCKVADEDFRLCLRINEVKWTEWKT
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Known secondary structure (DSSP)
SSTTTS
SS


SSSB




SSS
S



B
B

B

SS


 .........640.
Sequence HVSFLNEDPGP
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Known secondary structure (DSSP)


S

SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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