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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c6bx3A_ | 4.30 | PDB header: gene regulation/transferase | Chain: A: PDB Molecule: compass component swd3; |
Added to library: Sat Sep 8 08:49:14 2018 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | F | Q | F | V | T | P | V | G | T | Q | N | G | L | K | A | T | C | A | K | I | S | P | D | G | Q | F | L | A | I | T | Q | G | L | N | I | L | I | Y | D | I | N | R | R | T | V | S | Q | T | L | V | T | S | H | A | R | P | F | S | E | L | C | W | S | P | D | G | Q | C | I | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | S | S | S | S | S | B | B | T | T | B | B | T | T | T | B | S | S | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | T | A | S | D | D | F | S | V | E | I | I | H | L | S | Y | G | L | L | H | T | F | I | G | H | T | A | P | V | I | S | L | T | F | N | R | K | G | N | L | L | F | T | S | S | M | D | E | S | I | K | I | W | D | T | L | N | G | S | L | M | K | T | I | S | A | H | S | E | A | V |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | B | S | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | B | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | S | V | D | V | P | M | N | D | S | S | I | L | S | S | G | S | Y | D | G | L | I | R | I | F | D | A | E | T | G | H | C | L | K | T | L | T | Y | D | K | D | W | K | R | E | N | G | V | V | P | I | S | Q | V | K | F | S | E | N | A | R | Y | L | L | V | K | S | L | D | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | S | S | B | ![]() | ![]() | S | S | S | ![]() | ![]() | B | S | S | S | ![]() | ![]() | S | T | T | S | S | S | S | S | B | T | T | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | V | V | K | I | W | D | C | I | G | G | C | V | V | R | T | F | Q | V | Q | P | L | E | K | G | V | L | H | H | S | C | G | M | D | F | L | N | P | E | D | G | S | T | P | L | V | I | S | G | Y | E | N | G | D | I | Y | C | W | N | S | D | T | K | S | L | L | Q | L | L | D | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | T | T | S | S | S | S | B | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | S | S | S | B | S |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |
Sequence | S | L | Y | H | H | S | S | P | V | M | S | I | H | C | F | G | N | I | M | C | S | L | A | L | N | G | D | C | C | L | W | R | W | V | ||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | S | S | B | B | S | S | S | B | B | B | T | T | T | B | B |
Download: | PDB structure | FASTA sequence |
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