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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bduA_

Fold library idPDB HeaderMoleculeTitle
c6bduA_2.00PDB header: dna binding proteinChain: A: PDB Molecule: dna repair protein ppra;


Added to library: Sat Sep 8 08:19:39 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIYAAFDTLXSTAGVDSQIAALAASEADAGTLDAALTQSLQEAQGRWGLGLHHLRHEARLTDDGDIEILT
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Known secondary structure (DSSP)
TTT



TT





TTS

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGRPSARVSEGFGALAQAYAPXQALDERGLSQWAALGEGYRAPGDLPLAQLKVLIEHARDFETDWSAGRG
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Known secondary structure (DSSP) TTGGG
GGG

B
TTS
B
S
SS
SS

B
TT


SSB

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ETFQRVWRKGDTLFVEVARPASAEAALSKAAWKVIASIKDRAFQRELXRRSEKDGXLGALLGARHAGAKA
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Known secondary structure (DSSP) TTT



T


TS
 .........220.........230.........240.........250.........260.........
Sequence NLAQLPEAHFTVQAFVQTLSGAAARNAEEYRAALKTAAAALEEYQGVTTRQLSEVLRHG
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Known secondary structure (DSSP) TTSGGGT



GGGGG
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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