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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5owvA_

Fold library idPDB HeaderMoleculeTitle
c5owvA_3.72PDB header: lipid binding proteinChain: A: PDB Molecule: gtp-binding protein;


Added to library: Sat Sep 8 08:42:03 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKELFQKIWQNELQFLNFDAKFQDKSKLDTAECAIILSVNKDNYERYFLLKEFQELCKKIDLRVDIFSMQ
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Known secondary structure (DSSP)
STTT





S


S
S
SS
T

TTT
T

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NAQICILNLFKSGFISKQDLLKALKILEKISKNTEIFDFILQEKVQSIDQKALFQNDFKELNTINLELQK
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Known secondary structure (DSSP) TT



TTT


SS





 .........150.........160.........170.........180.........190.........200.........210
Sequence LDENLKSRLQKTLEKFQNLEFNIAITGVMNAGKSSLLNALLKEDFLGVETANLTVLSYGKSEEAKIYFWD
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Known secondary structure (DSSP)

SS


TTT
STS

S






SS



 .........220.........230.........240.........250.........260.........270.........280
Sequence KKEWQNILESSHFNADLKEFIDKLDKSVNIEPLIQNIALCELKNFSSAKNKISALIKKIEIKSHLEFLKN
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Known secondary structure (DSSP) SSTTS





SS




S

TTTTTTTTTT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLTQKDADFLVHCLLNSRLSKFLIVLTKADL
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Known secondary structure (DSSP) T


SSSTT

TT


T
TTT
S


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LSKKDLEEVIVYTKESLKSRLVDLDENLVEKIDFLCVSAKMASDFYKGLASKESLQKSGMQEFENYLFNE
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Known secondary structure (DSSP) S
TTTTS
SGGGGGGGG

SS
TTT
STTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LYAGEKSKIALRAYKKELHLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISN
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Known secondary structure (DSSP) TTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SIAKIDNLVLLLAKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILREIKFENIKKIEELK
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Known secondary structure (DSSP)

TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence TNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKIEKNLKSDLYELETNLDTVIFDTFKE
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Known secondary structure (DSSP) S
S




 .........640.........650.........660.........670.........680.........690.........
Sequence FKMSEILNSLNINGAFFEFLNDKLKHEKVLQSLKNQDANILNSFEENLEKIEKLKQLEMGLLNADKLHH
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Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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