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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6damA_

Fold library idPDB HeaderMoleculeTitle
c6damA_1.85PDB header: oxidoreductaseChain: A: PDB Molecule: lanthanide-dependent methanol dehydrogenase xoxf;


Added to library: Sat Sep 8 08:34:03 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSEVEKLTKNPANWATWGGNYHGTRYSELKQINTSNVKNLQPAWTFSTGVLRGHEGGPLVVNDVMYIHTP
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Known secondary structure (DSSP)
STT
B
STTSSTT





SS
TTTGGG

S

S


S

TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FPNTVYAIDQKTQAVIWEYTPQQDADVTIPVMCCDTVNRGLAYGDGKIFLQQSDTVLTALDAKTGKRVWS
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Known secondary structure (DSSP) TTT
TTTT




GGG
SS
S




TT
TTSTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VQNGDPKLGMTNTQAPLVVKDKVITGISGGEFGVRGFLAAYNIRTGELDWKGYSMGPDADTLINPTKTTT
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Known secondary structure (DSSP)
S
GGGT
B

S

TT

B
TTTT
B
TTT

SSSST

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence WKDGKVQPVGKDSSTSTWEGDQWKIGGGTTWGWYSYDPELNLVYYGSGNPSTWNPAQRPGDNKWSMSLWA
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Known secondary structure (DSSP) TT

TTTTGGGSSTTGGGG
B



S

TTTT



S
S
GGGS
S

TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RNADTGEVKWVYQMTPHDEWDYDGINEVALVDQEIKGQMRKTAVHFDRNGFGYTLDRVTGELLVAEKFDK
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Known secondary structure (DSSP) TTT

SSSS
SS




S

TT
TTSTTT

SST
 .........360.........370.........380.........390.........400.........410.........420
Sequence AVNWASHVDMKSGRPQVVSQYSTEYNGEDVNTEGVCPAALGSKNQQPVSYSPQTGYFYISGNHVCMDYEP
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Known secondary structure (DSSP) T

S
TTT


GGG

TT

SS
TT
SS
S


TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence FEVEYTAGQPYVGATLSMFPAGKDVITGKEDGSNNLGQFTAWDATTGKIIWSNKEQFSVWSGSLATAGGV
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Known secondary structure (DSSP)





TTS





B
TTT

B
S



TTTTSS


SB
TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VFYGTLEGYLKAVDAKTGKELYRFKTPSGIIGNVNTWEYEGKQYVGVLSGVGGWSLSSYTKLGGTLTVFA
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Known secondary structure (DSSP)
TT
TTT


SS


SB
TT





GGGT




 ...
Sequence LPN
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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