Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zvvA_

Fold library idPDB HeaderMoleculeTitle
c5zvvA_2.20PDB header: transcription regulatorChain: A: PDB Molecule: aimr transcriptional regulator;


Added to library: Sat Sep 8 08:20:33 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLKQXIKNECEKDNQLAARLAKLAGYEKVNGFYKFVNTPEKEXENLGGLLKIVKNLFPDSEEQLLSEYFL
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
T
T
SSTS
GGG


S
TTST
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELDPNKKCARQSVEYSDINQWDTLTDKIIINLCNSKNSTSQEWGKVYSLHRKLNKNEISLNDAIRESGKC
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TS
TTSTT
T
SSTT
S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence KIKSAEXLFFSNAXLXYAYLNIGEFGLXKSTSKLLEFDDLPEGFIKESFKSRVSXLEANISLNENSLLEA
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) T

STT
T

GGGS
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RQHSNRAIENSNVNRICFFAYLTIGNTLIFEDYDEAKKAYIKGQKYAKNPVHQEXLDGALCFLSNIWKKE
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)


TTTT
TGGG

ST

 .........290.........300.........310.........320.........330.........340.........350
Sequence NQWVNYNSDNIKYLQLRAFYYINQGNIEEATEILDELSSRDQDENELGFYYYYKGLISQDKTDYYKSIRY
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)





S


T
TS




 .........360.........370.........380..
Sequence FKKSDDKYFIQLPLLQLERXGADLELLNLISI
Predicted secondary structure








SS confidence































Known secondary structure (DSSP) TT
SSTTTT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D