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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5oxfB_

Fold library idPDB HeaderMoleculeTitle
c5oxfB_3.94PDB header: lipid binding proteinChain: B: PDB Molecule: gtp-binding protein;


Added to library: Sat Sep 8 08:28:30 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKELFQKIWQNELQFLNFDAKFQDKSKLDTAECAIILSVNKDNYERYFLLKEFQELCKKIDLRVDIFSMQ
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Known secondary structure (DSSP)
TTTT





S


SSTTSS
TTTTTS
T

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NAQICILNLFKSGFISKQDLLKALKILEKISKNTEIFDFILQEKVQSIDQKALFQNDFKELNTINLELQK
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Known secondary structure (DSSP) SS
S

TTTTS

T







 .........150.........160.........170.........180.........190.........200.........210
Sequence LDENLKSRLQKTLEKFQNLEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKI
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Known secondary structure (DSSP)

SS


TTT
STS

S

S

SS



SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence YFWDKKEWQNILESSHFNADLKEFIDKLDKSVNIEPLIQNIALCELKNFSSAKNKISALIKKIEIKSHLE
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Known secondary structure (DSSP)

SSTT
S





SS





S

STTTTTGGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence FLKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLTQKDADFLVHCLLNSRLSKFLIVLT
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Known secondary structure (DSSP) TT


SSSTT


TTS

T
TTS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence KADLLSKKDLEEVIVYTKESLKSRLVDLDENLVEKIDFLCVSAKMASDFYKGLASKESLQKSGMQEFENY
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Known secondary structure (DSSP)


SS
TTTTS
SGGGGGGGG


SS

S

STTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LFNELYAGEKSKIALRAYKKELHLELKNILSEYEMEENQKLLLELQKQNTLLKEAQDEISNSIAKLAKKL
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Known secondary structure (DSSP) TTTTS



 .........500.........510.........520.........530.........540.........550.........560
Sequence KERLIDEFKYLKTKDGINDILREIKFENIKKIEELKTNLSLKYDFLKDDFDNGFEGFAFFEFLNDKLKHY
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Known secondary structure (DSSP)







 .........570.........580.........590.
Sequence EKNQKSKNSFEENLEKIEKLKQLEMGLLNAD
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Known secondary structure (DSSP)

TTGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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