Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionO33599
DateTue Jul 17 17:05:02 BST 2012
Unique Job ID9adb4d7a0a807763

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2gu1A_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:zinc peptidase;
PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
Confidence and coverage
Confidence:100.0% Coverage: 83%
261 residues ( 83% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MKKLTAAAIATMGFATFTMAHQADAAETTNTQQAHTQMSTQSQDVSYGTYYTIDSNGDYH
Secondary structure 
SS confidence 
Disorder  ???????????????????????????????
?????
??
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  HTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANANGSGQTYVNPATAGDNNDY
Secondary structure 
SS confidence 
Disorder 
?
???
?
?
?
?????????
?
??
?
??
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  TASQSQQHINQYGYQSNVGPDASYYSHSNNNQAYNSHDGNGKVNYPNGTSNQNGGSASKA
Secondary structure 
SS confidence 
Disorder 
????????????
?????????????????????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  TASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYG
Secondary structure 
SS confidence 
Disorder  ?????????????
?
?
?
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  GGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGG
Secondary structure 
SS confidence 
Disorder 
???
Disorder confidence 
 
   .........310......
Sequence  IGNQYAVDPTSYLQSR
Secondary structure 
SS confidence 
Disorder 
????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2gu1 chain A

3D model

Region: 48 - 314
Aligned: 261
Modelled: 267
Confidence: 100.0%
Identity: 18%
PDB header:hydrolase
Chain: A: PDB Molecule:zinc peptidase;
PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae

Phyre2

PDB 3slu chain B

3D model

Region: 169 - 316
Aligned: 141
Modelled: 148
Confidence: 100.0%
Identity: 31%
PDB header:hydrolase
Chain: B: PDB Molecule:m23 peptidase domain protein;
PDBTitle: crystal structure of nmb0315

Phyre2

PDB 2hsi chain B

3D model

Region: 177 - 315
Aligned: 127
Modelled: 139
Confidence: 100.0%
Identity: 24%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative peptidase m23;
PDBTitle: crystal structure of putative peptidase m23 from2 pseudomonas aeruginosa, new york structural genomics3 consortium

Phyre2

PDB 1qwy chain A

3D model

Region: 46 - 314
Aligned: 231
Modelled: 233
Confidence: 100.0%
Identity: 96%
Fold: Barrel-sandwich hybrid
Superfamily: Duplicated hybrid motif
Family: Peptidoglycan hydrolase LytM

Phyre2

PDB 2b44 chain A

3D model

Region: 186 - 314
Aligned: 129
Modelled: 129
Confidence: 100.0%
Identity: 100%
PDB header:hydrolase
Chain: A: PDB Molecule:glycyl-glycine endopeptidase lytm;
PDBTitle: truncated s. aureus lytm, p 32 2 1 crystal form

Phyre2

PDB 3nyy chain A

3D model

Region: 107 - 314
Aligned: 205
Modelled: 208
Confidence: 100.0%
Identity: 21%
PDB header:hydrolase
Chain: A: PDB Molecule:putative glycyl-glycine endopeptidase lytm;
PDBTitle: crystal structure of a putative glycyl-glycine endopeptidase lytm2 (rumgna_02482) from ruminococcus gnavus atcc 29149 at 1.60 a3 resolution

Phyre2

PDB 3tuf chain B

3D model

Region: 188 - 315
Aligned: 122
Modelled: 128
Confidence: 100.0%
Identity: 25%
PDB header:signaling protein
Chain: B: PDB Molecule:stage ii sporulation protein q;
PDBTitle: structure of the spoiiq-spoiiiah pore forming complex.

Phyre2

PDB 3uz0 chain D

3D model

Region: 173 - 313
Aligned: 135
Modelled: 140
Confidence: 100.0%
Identity: 24%
PDB header:transport protein
Chain: D: PDB Molecule:stage ii sporulation protein q;
PDBTitle: crystal structure of spoiiiah and spoiiq complex

Phyre2

PDB 3it5 chain B

3D model

Region: 183 - 300
Aligned: 117
Modelled: 117
Confidence: 100.0%
Identity: 22%
PDB header:hydrolase
Chain: B: PDB Molecule:protease lasa;
PDBTitle: crystal structure of the lasa virulence factor from pseudomonas2 aeruginosa

Phyre2

PDB 3csq chain C

3D model

Region: 197 - 310
Aligned: 105
Modelled: 114
Confidence: 99.9%
Identity: 24%
PDB header:hydrolase
Chain: C: PDB Molecule:morphogenesis protein 1;
PDBTitle: crystal and cryoem structural studies of a cell wall2 degrading enzyme in the bacteriophage phi29 tail

Phyre2

PDB 2f3g chain A

3D model

Region: 218 - 281
Aligned: 58
Modelled: 64
Confidence: 96.7%
Identity: 21%
Fold: Barrel-sandwich hybrid
Superfamily: Duplicated hybrid motif
Family: Glucose permease-like

Phyre2

PDB 1gla chain F

3D model

Region: 218 - 281
Aligned: 58
Modelled: 64
Confidence: 96.5%
Identity: 21%
Fold: Barrel-sandwich hybrid
Superfamily: Duplicated hybrid motif
Family: Glucose permease-like

Phyre2

PDB 2gpr chain A

3D model

Region: 218 - 281
Aligned: 58
Modelled: 64
Confidence: 96.3%
Identity: 21%
Fold: Barrel-sandwich hybrid
Superfamily: Duplicated hybrid motif
Family: Glucose permease-like

Phyre2

PDB 1gpr chain A

3D model

Region: 218 - 281
Aligned: 58
Modelled: 64
Confidence: 96.2%
Identity: 19%
Fold: Barrel-sandwich hybrid
Superfamily: Duplicated hybrid motif
Family: Glucose permease-like

Phyre2

PDB 1ci3 chain M domain 2

3D model

Region: 225 - 278
Aligned: 53
Modelled: 54
Confidence: 95.6%
Identity: 23%
Fold: Barrel-sandwich hybrid
Superfamily: Rudiment single hybrid motif
Family: Cytochrome f, small domain

Phyre2

PDB 1e2w chain A domain 2

3D model

Region: 225 - 278
Aligned: 54
Modelled: 54
Confidence: 95.5%
Identity: 26%
Fold: Barrel-sandwich hybrid
Superfamily: Rudiment single hybrid motif
Family: Cytochrome f, small domain

Phyre2

PDB 2lmc chain B

3D model

Region: 223 - 278
Aligned: 55
Modelled: 56
Confidence: 94.5%
Identity: 22%
PDB header:transcription
Chain: B: PDB Molecule:dna-directed rna polymerase subunit beta;
PDBTitle: structure of t7 transcription factor gp2-e. coli rnap jaw domain2 complex

Phyre2

PDB 2auk chain A

3D model

Region: 215 - 280
Aligned: 66
Modelled: 66
Confidence: 94.1%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase beta' chain;
PDBTitle: structure of e. coli rna polymerase beta' g/g' insert

Phyre2

PDB 1e2v chain B

3D model

Region: 225 - 278
Aligned: 53
Modelled: 54
Confidence: 94.0%
Identity: 26%
PDB header:electron transport proteins
Chain: B: PDB Molecule:cytochrome f;
PDBTitle: n153q mutant of cytochrome f from chlamydomonas reinhardtii

Phyre2

PDB 1q90 chain A

3D model

Region: 225 - 278
Aligned: 53
Modelled: 54
Confidence: 93.8%
Identity: 26%
PDB header:photosynthesis
Chain: A: PDB Molecule:apocytochrome f;
PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii

Phyre2
1
c2gu1A_
2
c3sluB_
3
c2hsiB_
4
d1qwya_
5
c2b44A_
6
c3nyyA_
7
c3tufB_
8
c3uz0D_
9
c3it5B_
10
c3csqC_
11
d2f3ga_
12
d1glaf_
13
d2gpra_
14
d1gpra_
15
d1ci3m2
16
d1e2wa2
17
c2lmcB_
18
c2aukA_
19
c1e2vB_
20
c1q90A_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2gu1A_
100.0 18 PDB header:hydrolase
Chain: A: PDB Molecule:zinc peptidase;
PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
2c3sluB_
100.0 31 PDB header:hydrolase
Chain: B: PDB Molecule:m23 peptidase domain protein;
PDBTitle: crystal structure of nmb0315
3c2hsiB_
100.0 24 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative peptidase m23;
PDBTitle: crystal structure of putative peptidase m23 from2 pseudomonas aeruginosa, new york structural genomics3 consortium
4d1qwya_
100.0 96 Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Peptidoglycan hydrolase LytM
5c2b44A_
100.0 100 PDB header:hydrolase
Chain: A: PDB Molecule:glycyl-glycine endopeptidase lytm;
PDBTitle: truncated s. aureus lytm, p 32 2 1 crystal form
6c3nyyA_
100.0 21 PDB header:hydrolase
Chain: A: PDB Molecule:putative glycyl-glycine endopeptidase lytm;
PDBTitle: crystal structure of a putative glycyl-glycine endopeptidase lytm2 (rumgna_02482) from ruminococcus gnavus atcc 29149 at 1.60 a3 resolution
7c3tufB_
100.0 25 PDB header:signaling protein
Chain: B: PDB Molecule:stage ii sporulation protein q;
PDBTitle: structure of the spoiiq-spoiiiah pore forming complex.
8c3uz0D_
100.0 24 PDB header:transport protein
Chain: D: PDB Molecule:stage ii sporulation protein q;
PDBTitle: crystal structure of spoiiiah and spoiiq complex
9c3it5B_
100.0 22 PDB header:hydrolase
Chain: B: PDB Molecule:protease lasa;
PDBTitle: crystal structure of the lasa virulence factor from pseudomonas2 aeruginosa
10c3csqC_
99.9 24 PDB header:hydrolase
Chain: C: PDB Molecule:morphogenesis protein 1;
PDBTitle: crystal and cryoem structural studies of a cell wall2 degrading enzyme in the bacteriophage phi29 tail
11d2f3ga_
96.7 21 Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
12d1glaf_
96.5 21 Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
13d2gpra_
96.3 21 Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
14d1gpra_
96.2 19 Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
15d1ci3m2
95.6 23 Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:Cytochrome f, small domain
16d1e2wa2
95.5 26 Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:Cytochrome f, small domain
17c2lmcB_
94.5 22 PDB header:transcription
Chain: B: PDB Molecule:dna-directed rna polymerase subunit beta;
PDBTitle: structure of t7 transcription factor gp2-e. coli rnap jaw domain2 complex
18c2aukA_
94.1 18 PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase beta' chain;
PDBTitle: structure of e. coli rna polymerase beta' g/g' insert
19c1e2vB_
94.0 26 PDB header:electron transport proteins
Chain: B: PDB Molecule:cytochrome f;
PDBTitle: n153q mutant of cytochrome f from chlamydomonas reinhardtii
20c1q90A_
93.8 26 PDB header:photosynthesis
Chain: A: PDB Molecule:apocytochrome f;
PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii
21c2jxmB_
not modelled 92.8 25 PDB header:electron transport
Chain: B: PDB Molecule:cytochrome f;
PDBTitle: ensemble of twenty structures of the prochlorothrix2 hollandica plastocyanin- cytochrome f complex
22c1tu2B_
not modelled 90.3 26 PDB header:electron transport
Chain: B: PDB Molecule:apocytochrome f;
PDBTitle: the complex of nostoc cytochrome f and plastocyanin determin with2 paramagnetic nmr. based on the structures of cytochrome f and3 plastocyanin, 10 structures
23c1ctmA_
not modelled 87.9 17 PDB header:electron transport(cytochrome)
Chain: A: PDB Molecule:cytochrome f;
PDBTitle: crystal structure of chloroplast cytochrome f reveals a2 novel cytochrome fold and unexpected heme ligation
24c2l9yA_
not modelled 87.6 4 PDB header:sugar binding protein
Chain: A: PDB Molecule:cvnh-lysm lectin;
PDBTitle: solution structure of the mocvnh-lysm module from the rice blast2 fungus magnaporthe oryzae protein (mgg_03307)
25d1bdoa_
not modelled 87.1 18 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
26d1tu2b2
not modelled 86.4 26 Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:Cytochrome f, small domain
27d1brwa3
not modelled 86.3 25 Fold:alpha/beta-Hammerhead
Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain
Family:Pyrimidine nucleoside phosphorylase C-terminal domain
28c1t5eB_
not modelled 85.3 26 PDB header:transport protein
Chain: B: PDB Molecule:multidrug resistance protein mexa;
PDBTitle: the structure of mexa
29c3lnnB_
not modelled 84.8 35 PDB header:metal transport
Chain: B: PDB Molecule:membrane fusion protein (mfp) heavy metal cation efflux
PDBTitle: crystal structure of zneb from cupriavidus metallidurans
30c2ejgD_
not modelled 84.8 26 PDB header:ligase
Chain: D: PDB Molecule:149aa long hypothetical methylmalonyl-coa decarboxylase
PDBTitle: crystal structure of the biotin protein ligase (mutation r48a) and2 biotin carboxyl carrier protein complex from pyrococcus horikoshii3 ot3
31c2k33A_
not modelled 83.4 30 PDB header:membrane protein, transport protein
Chain: A: PDB Molecule:acra;
PDBTitle: solution structure of an n-glycosylated protein using in2 vitro glycosylation
32c2f1mA_
not modelled 83.4 13 PDB header:transport protein
Chain: A: PDB Molecule:acriflavine resistance protein a;
PDBTitle: conformational flexibility in the multidrug efflux system protein acra
33d1o78a_
not modelled 82.9 30 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
34c2e75C_
not modelled 82.7 26 PDB header:photosynthesis
Chain: C: PDB Molecule:apocytochrome f;
PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus
35c4dk1B_
not modelled 82.4 35 PDB header:membrane protein
Chain: B: PDB Molecule:putative maca, multidrug resistance protein mexa;
PDBTitle: crystal structure of maca-mexa chimeric protein, containing the2 pseudomonas aeruginosa mexa alpha-hairpin domain.
36c2djpA_
not modelled 81.2 9 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein sb145;
PDBTitle: the solution structure of the lysm domain of human2 hypothetical protein sb145
37d1vf7a_
not modelled 81.1 23 Fold:HlyD-like secretion proteins
Superfamily:HlyD-like secretion proteins
Family:HlyD-like secretion proteins
38c2kccA_
not modelled 79.8 17 PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: solution structure of biotinoyl domain from human acetyl-2 coa carboxylase 2
39c3fppB_
not modelled 79.0 30 PDB header:membrane protein
Chain: B: PDB Molecule:macrolide-specific efflux protein maca;
PDBTitle: crystal structure of e.coli maca
40c2ejmA_
not modelled 78.4 43 PDB header:ligase
Chain: A: PDB Molecule:methylcrotonoyl-coa carboxylase subunit alpha;
PDBTitle: solution structure of ruh-072, an apo-biotnyl domain form2 human acetyl coenzyme a carboxylase
41c2dn8A_
not modelled 77.9 30 PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: solution structure of rsgi ruh-053, an apo-biotin carboxy2 carrier protein from human transcarboxylase
42c2b8gA_
not modelled 77.9 26 PDB header:biosynthetic protein
Chain: A: PDB Molecule:biotin/lipoyl attachment protein;
PDBTitle: solution structure of bacillus subtilis blap biotinylated-2 form (energy minimized mean structure)
43d1dcza_
not modelled 76.2 17 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
44c2l5tA_
not modelled 74.5 22 PDB header:transferase
Chain: A: PDB Molecule:lipoamide acyltransferase;
PDBTitle: solution nmr structure of e2 lipoyl domain from thermoplasma2 acidophilum
45c2q8iB_
not modelled 74.2 26 PDB header:transferase
Chain: B: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase component of
PDBTitle: pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug2 radicicol
46c4dk0A_
not modelled 73.5 35 PDB header:membrane protein
Chain: A: PDB Molecule:putative maca;
PDBTitle: crystal structure of maca from actinobacillus actinomycetemcomitans
47d1qjoa_
not modelled 72.8 34 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
48c2dsjA_
not modelled 72.1 24 PDB header:transferase
Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase;
PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8
49d1uoua3
not modelled 71.5 19 Fold:alpha/beta-Hammerhead
Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain
Family:Pyrimidine nucleoside phosphorylase C-terminal domain
50c3n6rK_
not modelled 70.8 19 PDB header:ligase
Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
51d1y8ob1
not modelled 69.7 26 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
52d1e0ga_
not modelled 68.3 7 Fold:LysM domain
Superfamily:LysM domain
Family:LysM domain
53d1laba_
not modelled 67.9 14 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
54d2pnrc1
not modelled 67.0 26 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
55c2dneA_
not modelled 65.1 35 PDB header:transferase
Chain: A: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase
PDBTitle: solution structure of rsgi ruh-058, a lipoyl domain of2 human 2-oxoacid dehydrogenase
56c2xhaB_
not modelled 64.8 21 PDB header:transcription
Chain: B: PDB Molecule:transcription antitermination protein nusg;
PDBTitle: crystal structure of domain 2 of thermotoga maritima n-utilization2 substance g (nusg)
57d2tpta3
not modelled 64.7 21 Fold:alpha/beta-Hammerhead
Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain
Family:Pyrimidine nucleoside phosphorylase C-terminal domain
58c3fmcC_
not modelled 64.3 17 PDB header:hydrolase
Chain: C: PDB Molecule:putative succinylglutamate desuccinylase / aspartoacylase;
PDBTitle: crystal structure of a putative succinylglutamate desuccinylase /2 aspartoacylase family protein (sama_0604) from shewanella amazonensis3 sb2b at 1.80 a resolution
59c2jkuA_
not modelled 64.1 26 PDB header:ligase
Chain: A: PDB Molecule:propionyl-coa carboxylase alpha chain,
PDBTitle: crystal structure of the n-terminal region of the biotin2 acceptor domain of human propionyl-coa carboxylase
60c2qj8B_
not modelled 63.9 29 PDB header:hydrolase
Chain: B: PDB Molecule:mlr6093 protein;
PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution
61c2dncA_
not modelled 63.8 22 PDB header:transferase
Chain: A: PDB Molecule:pyruvate dehydrogenase protein x component;
PDBTitle: solution structure of rsgi ruh-054, a lipoyl domain from2 human 2-oxoacid dehydrogenase
62d1gjxa_
not modelled 63.3 24 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
63c3h9iB_
not modelled 62.4 22 PDB header:transport protein
Chain: B: PDB Molecule:cation efflux system protein cusb;
PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli
64d1y7ma2
not modelled 61.3 7 Fold:LysM domain
Superfamily:LysM domain
Family:LysM domain
65d1hcza2
not modelled 61.2 17 Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:Cytochrome f, small domain
66d1k8ma_
not modelled 59.6 10 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
67c2aujD_
not modelled 59.6 14 PDB header:transferase
Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain;
PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert
68c3va7A_
not modelled 59.4 26 PDB header:ligase
Chain: A: PDB Molecule:klla0e08119p;
PDBTitle: crystal structure of the kluyveromyces lactis urea carboxylase
69c3na6A_
not modelled 58.1 30 PDB header:hydrolase
Chain: A: PDB Molecule:succinylglutamate desuccinylase/aspartoacylase;
PDBTitle: crystal structure of a succinylglutamate desuccinylase (tm1040_2694)2 from silicibacter sp. tm1040 at 2.00 a resolution
70d1ghja_
not modelled 54.8 14 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
71d1pmra_
not modelled 54.7 8 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
72c3cdxB_
not modelled 54.4 24 PDB header:hydrolase
Chain: B: PDB Molecule:succinylglutamatedesuccinylase/aspartoacylase;
PDBTitle: crystal structure of2 succinylglutamatedesuccinylase/aspartoacylase from3 rhodobacter sphaeroides
73c3t51C_
not modelled 49.0 22 PDB header:transport protein
Chain: C: PDB Molecule:cation efflux system protein cusb;
PDBTitle: crystal structures of the pre-extrusion and extrusion states of the2 cusba adaptor-transporter complex
74c3ozxA_
not modelled 47.4 15 PDB header:hydrolase, translation
Chain: A: PDB Molecule:rnase l inhibitor;
PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
75d1v8qa_
not modelled 46.9 24 Fold:Barrel-sandwich hybrid
Superfamily:Ribosomal L27 protein-like
Family:Ribosomal L27 protein
76d1iyua_
not modelled 46.3 20 Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
77d2zjrt1
not modelled 46.1 28 Fold:Barrel-sandwich hybrid
Superfamily:Ribosomal L27 protein-like
Family:Ribosomal L27 protein
78c2kw8A_
not modelled 45.6 19 PDB header:protein binding
Chain: A: PDB Molecule:lpxtg-site transpeptidase family protein;
PDBTitle: solution structure of bacillus anthracis sortase a (srta)2 transpeptidase
79d1vf5c2
not modelled 44.1 28 Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:Cytochrome f, small domain
80c3fin0_
not modelled 43.7 24 PDB header:ribosome
Chain: 0: PDB Molecule:50s ribosomal protein l27;
PDBTitle: t. thermophilus 70s ribosome in complex with mrna, trnas and ef-2 tu.gdp.kirromycin ternary complex, fitted to a 6.4 a cryo-em map.3 this file contains the 50s subunit.
81c3h5qA_
not modelled 42.7 33 PDB header:transferase
Chain: A: PDB Molecule:pyrimidine-nucleoside phosphorylase;
PDBTitle: crystal structure of a putative pyrimidine-nucleoside phosphorylase2 from staphylococcus aureus
82c1brwB_
not modelled 42.4 32 PDB header:transferase
Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase);
PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation
83c2j0fC_
not modelled 41.2 21 PDB header:transferase
Chain: C: PDB Molecule:thymidine phosphorylase;
PDBTitle: structural basis for non-competitive product inhibition in2 human thymidine phosphorylase: implication for drug design
84c2xhcA_
not modelled 40.6 21 PDB header:transcription
Chain: A: PDB Molecule:transcription antitermination protein nusg;
PDBTitle: crystal structure of thermotoga maritima n-utilization substance g2 (nusg)
85c1otpA_
not modelled 40.0 22 PDB header:phosphorylase
Chain: A: PDB Molecule:thymidine phosphorylase;
PDBTitle: structural and theoretical studies suggest domain movement produces an2 active conformation of thymidine phosphorylase
86c2x5cB_
not modelled 39.8 17 PDB header:viral protein
Chain: B: PDB Molecule:hypothetical protein orf131;
PDBTitle: crystal structure of hypothetical protein orf131 from2 pyrobaculum spherical virus
87c2ftcO_
not modelled 36.5 24 PDB header:ribosome
Chain: O: PDB Molecule:mitochondrial 39s ribosomal protein l27;
PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome
88c4ebzA_
not modelled 34.3 12 PDB header:transferase
Chain: A: PDB Molecule:chitin elicitor receptor kinase 1;
PDBTitle: crystal structure of the ectodomain of a receptor like kinase
89c2w1kB_
not modelled 33.6 18 PDB header:transferase
Chain: B: PDB Molecule:putative sortase;
PDBTitle: crystal structure of sortase c-3 (srtc-3) from2 streptococcus pneumoniae
90d1o4ua2
not modelled 32.3 16 Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:NadC N-terminal domain-like
91c3ilaG_
not modelled 31.0 24 PDB header:signaling protein
Chain: G: PDB Molecule:ryanodine receptor 1;
PDBTitle: crystal structure of rabbit ryanodine receptor 1 n-terminal domain (9-2 205)
92c3camB_
not modelled 29.5 23 PDB header:gene regulation
Chain: B: PDB Molecule:cold-shock domain family protein;
PDBTitle: crystal structure of the cold shock domain protein from neisseria2 meningitidis
93c3n7xA_
not modelled 28.7 20 PDB header:virus
Chain: A: PDB Molecule:capsid protein;
PDBTitle: crystal structure of penaeus stylirostris densovirus capsid
94c3bboX_
not modelled 28.6 28 PDB header:ribosome
Chain: X: PDB Molecule:ribosomal protein l27;
PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome
95d2gycu1
not modelled 27.5 21 Fold:Barrel-sandwich hybrid
Superfamily:Ribosomal L27 protein-like
Family:Ribosomal L27 protein
96c3o0pA_
not modelled 26.6 22 PDB header:transferase , hydrolase
Chain: A: PDB Molecule:sortase family protein;
PDBTitle: pilus-related sortase c of group b streptococcus
97d1qapa2
not modelled 24.6 21 Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:NadC N-terminal domain-like
98c2vbcA_
not modelled 24.3 20 PDB header:hydrolase
Chain: A: PDB Molecule:dengue 4 ns3 full-length protein;
PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus
99c2qf7A_
not modelled 23.0 19 PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase protein;
PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli
100c2boyC_
not modelled 22.5 24 PDB header:oxidoreductase
Chain: C: PDB Molecule:3-chlorocatechol 1,2-dioxygenase;
PDBTitle: crystal structure of 3-chlorocatechol 1,2-dioxygenase from2 rhodococcus opacus 1cp
101d1k8ga2
not modelled 21.1 21 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
102c3howC_
not modelled 20.7 16 PDB header:transcription,transferase/dna/rna hybrid
Chain: C: PDB Molecule:dna-directed rna polymerase ii subunit rpb3;
PDBTitle: complete rna polymerase ii elongation complex iii with a t-u2 mismatch and a frayed rna 3'-uridine

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