Fold library entry viewer: c1otpA_

Added to library: Tue Mar 16 12:29:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	F	L	A	Q	E	I	I	R	K	K	R	D	G	H	A	L	S	D	E	E	I	R	F	F	I	N	G	I	R	D	N	T	I	S	E	G	Q	I	A	A	L	A	M	T	I	F	F	H	D	M	T	M	P	E	R	V	S	L	T	M	A	M	R	D	S	G	T	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T																	T	T		S																																	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	W	K	S	L	H	L	N	G	P	I	V	D	K	H	S	T	G	G	V	G	D	V	T	S	L	M	L	G	P	M	V	A	A	C	G	G	Y	I	P	M	I	S	G	R	G	L	G	H	T	G	G	T	L	D	K	L	E	S	I	P	G	F	D	I	F	P	D	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T		S	S		B	B					S			T	T		T	T										T	T	T		B										S	T	T								T	T	S	T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	F	R	E	I	I	K	D	V	G	V	A	I	I	G	Q	T	S	S	L	A	P	A	D	K	R	F	Y	A	T	R	D	I	T	A	T	V	D	S	I	P	L	I	T	A	S	I	L	A	K	K	L	A	E	G	L	D	A	L	V	M	D	V	K	V	G	S	G	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S								S		S		T													T																		T	T			S									S	T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	P	T	Y	E	L	S	E	A	L	A	E	A	I	V	G	V	A	N	G	A	G	V	R	T	T	A	L	L	T	D	M	N	Q	V	L	A	S	S	A	G	N	A	V	E	V	R	E	A	V	Q	F	L	T	G	E	Y	R	N	P	R	L	F	D	V	T	M	A	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S																		T	T											S	S		S	S	S				S												T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	E	M	L	I	S	G	K	L	A	K	D	D	A	E	A	R	A	K	L	Q	A	V	L	D	N	G	K	A	A	E	V	F	G	R	M	V	A	A	Q	K	G	P	T	D	F	V	E	N	Y	A	K	Y	L	P	T	A	M	L	T	K	A	V	Y	A	D	T	E	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		S	S														S	S													T	T	S		T	T									S				S								S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	S	E	M	D	T	R	A	L	G	M	A	V	V	A	M	G	G	G	R	R	Q	A	S	D	T	I	D	Y	S	V	G	F	T	D	M	A	R	L	G	D	Q	V	D	G	Q	R	P	L	A	V	I	H	A	K	D	E	N	N	W	Q	E	A	A	K	A	V	K	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S		S	S	S	S	S				S	S					S				T	T					T	T	S								S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Sequence	I	K	L	A	D	K	A	P	E	S	T	P	T	V	Y	R	R	I	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S							S

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PDB structure

FASTA sequence

Hidden Markov model

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