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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2gu1A_

Fold library idPDB HeaderMoleculeTitle
c2gu1A_PDB header: hydrolaseChain: A: PDB Molecule: zinc peptidase;PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae


Added to library: Tue Mar 16 13:19:14 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RIHYMVKVGDTLSGIFAQLGVPYSILQKILSVDLDHLQLDMIQPGEELELMMDDMGQLSRLIYHMSIVEK
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Known secondary structure (DSSP)


TT

TT

GGGT

GGG

TT

TTS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AIYTRENDGSFSYDFQEISGEWREILFSGEINGSFSVSARRVGLTSSQVANITQVMKDKIDFSRSLRADR
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Known secondary structure (DSSP)
TTS



SSS
TT

TTT

TTT




 .........150.........160.........170.........180.........190.........200.........210
Sequence FDILVKQQYLGEHNTGNSEIKAISFKLAKGDVSAFLAEDGRFYDRAGNSLERAFNRYPVDKAYRQITSGF
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Known secondary structure (DSSP) TT
TT


TTS
TTS
BSS



S
SS
GGG



 .........220.........230.........240.........250.........260.........270.........280
Sequence NPKRKHPVTGRVVPHNGTDFATPIGAPVYSTGDGKVIVVRKHPYAGNYLVIEHNSVYKTRYLHLDKILVK
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Known secondary structure (DSSP) BTT
B
TTT

B

B
S


TT

SSSTTT
SSSS


 .........290.........300.........310.........320....
Sequence KGQLVKRGQKIALAGATGRLTGPHLHFEVLVRNRPVDAMKADLP
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Known secondary structure (DSSP) TT

TT




SS
SS

TT
TT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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