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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1qwya_

Fold library idFoldSuperfamilyFamily
d1qwya_Barrel-sandwich hybridDuplicated hybrid motifPeptidoglycan hydrolase LytM


Added to library: Tue Mar 16 14:19:08 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANANGSGQTYVNPATA
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Known secondary structure (DSSP)

TTS
TTS
SSS


TT



TTS
SS


SS
SS




S

SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence GDNNDYTASQSQQHINQYGYQSNVGPDASYYSSGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPEN
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Known secondary structure (DSSP) T










SS



GGGT




SS
TS

S
TTSS
S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGNSTAP
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Known secondary structure (DSSP)

SSSTTTTTTSSS


TT

TT




SS
SSS
 .........220.........230....
Sequence HVHFQRMSGGIGNQYAVDPTSYLQ
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Known secondary structure (DSSP) SSGGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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