Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ4QQM4
DateTue Jul 30 13:10:26 BST 2013
Unique Job ID24c8b9f7d2ca641e
SequenceMAGKQPPPLM ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.397 Y:22.539 Z:39.378
Model (left) based on template c3zf7S_
Top template information
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
Confidence and coverage
Confidence: 22.9% Coverage: 20%
38 residues ( 20% of your sequence) have been modelled with 22.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MAGKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAVREPL
Secondary structure 
SS confidence 
Disorder  ???????
??
?
?
??????
?
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  GLRVWQFLSAMLFSSVAIMALALPDQLYDAVFDGAEVTSKTPIRLYGGALLSISLIMWNA
Secondary structure 
SS confidence 
Disorder 
?????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  LYTAEKVIIRWTLLTEACYFGVQSLVVTATLAETGLMSLGTVLLLASRLLFVIVSIYYYY
Secondary structure 
SS confidence 
Disorder 
?
???????
Disorder confidence 
 
   .........
Sequence  QVGRKPKKV
Secondary structure 
SS confidence 
Disorder 
???????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 20%)
Alpha helix ( 76%)
Beta strand ( 0%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3zf7 chain S

3D model

Region: 16 - 54
Aligned: 38
Modelled: 39
Confidence: 22.9%
Identity: 34%
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome

Phyre2

PDB 3qoq chain C

3D model

Region: 51 - 63
Aligned: 13
Modelled: 11
Confidence: 20.2%
Identity: 54%
PDB header:transcription/dna
Chain: C: PDB Molecule:alginate and motility regulator z;
PDBTitle: crystal structure of the transcription factor amrz in complex with the2 18 base pair amrz1 binding site

Phyre2

PDB 2hjn chain A

3D model

Region: 41 - 105
Aligned: 63
Modelled: 65
Confidence: 17.1%
Identity: 13%
PDB header:cell cycle
Chain: A: PDB Molecule:maintenance of ploidy protein mob1;
PDBTitle: structural and functional analysis of saccharomyces2 cerevisiae mob1

Phyre2

PDB 1ixr chain C domain 1

3D model

Region: 35 - 61
Aligned: 27
Modelled: 27
Confidence: 17.0%
Identity: 30%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Helicase DNA-binding domain

Phyre2

PDB 1in4 chain A domain 1

3D model

Region: 35 - 61
Aligned: 27
Modelled: 27
Confidence: 15.4%
Identity: 30%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Helicase DNA-binding domain

Phyre2

PDB 3j39 chain S

3D model

Region: 16 - 54
Aligned: 38
Modelled: 39
Confidence: 15.2%
Identity: 26%
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins

Phyre2

PDB 2v6x chain B

3D model

Region: 16 - 26
Aligned: 11
Modelled: 11
Confidence: 14.3%
Identity: 55%
PDB header:protein transport
Chain: B: PDB Molecule:doa4-independent degradation protein 4;
PDBTitle: stractural insight into the interaction between escrt-iii2 and vps4

Phyre2

PDB 3nr5 chain A

3D model

Region: 72 - 90
Aligned: 17
Modelled: 19
Confidence: 14.2%
Identity: 41%
PDB header:transcription
Chain: A: PDB Molecule:repressor of rna polymerase iii transcription maf1 homolog;
PDBTitle: crystal structure of human maf1

Phyre2

PDB 1rk8 chain B

3D model

Region: 59 - 78
Aligned: 20
Modelled: 20
Confidence: 13.8%
Identity: 40%
Fold: Mago nashi protein
Superfamily: Mago nashi protein
Family: Mago nashi protein

Phyre2

PDB 1t0f chain C

3D model

Region: 83 - 107
Aligned: 25
Modelled: 25
Confidence: 13.7%
Identity: 24%
PDB header:dna binding protein
Chain: C: PDB Molecule:transposon tn7 transposition protein tnsc;
PDBTitle: crystal structure of the tnsa/tnsc(504-555) complex

Phyre2

PDB 1mnt chain A

3D model

Region: 51 - 63
Aligned: 13
Modelled: 13
Confidence: 13.1%
Identity: 31%
Fold: Ribbon-helix-helix
Superfamily: Ribbon-helix-helix
Family: Arc/Mnt-like phage repressors

Phyre2

PDB 3pcq chain X

3D model

Region: 155 - 180
Aligned: 26
Modelled: 26
Confidence: 12.7%
Identity: 15%
PDB header:photosynthesis
Chain: X: PDB Molecule:photosystem i 4.8k protein;
PDBTitle: femtosecond x-ray protein nanocrystallography

Phyre2

PDB 1yew chain F

3D model

Region: 106 - 118
Aligned: 13
Modelled: 13
Confidence: 12.6%
Identity: 15%
PDB header:oxidoreductase, membrane protein
Chain: F: PDB Molecule:particulate methane monooxygenase, a subunit;
PDBTitle: crystal structure of particulate methane monooxygenase

Phyre2

PDB 3di3 chain A

3D model

Region: 7 - 46
Aligned: 39
Modelled: 40
Confidence: 12.4%
Identity: 26%
PDB header:cytokine/cytokine receptor
Chain: A: PDB Molecule:interleukin-7;
PDBTitle: crystal structure of the complex of human interleukin-7 with2 glycosylated human interleukin-7 receptor alpha ectodomain

Phyre2

PDB 3j3b chain S

3D model

Region: 16 - 54
Aligned: 38
Modelled: 39
Confidence: 12.4%
Identity: 29%
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a;
PDBTitle: structure of the human 60s ribosomal proteins

Phyre2

PDB 1u9p chain A

3D model

Region: 49 - 63
Aligned: 15
Modelled: 15
Confidence: 12.2%
Identity: 27%
PDB header:unknown function
Chain: A: PDB Molecule:parc;
PDBTitle: permuted single-chain arc

Phyre2

PDB 3izc chain S

3D model

Region: 16 - 54
Aligned: 38
Modelled: 39
Confidence: 12.1%
Identity: 26%
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein rpl20 (l18ae);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome

Phyre2

PDB 3twf chain A

3D model

Region: 17 - 26
Aligned: 10
Modelled: 10
Confidence: 11.7%
Identity: 60%
PDB header:unknown function
Chain: A: PDB Molecule:alpha4f3a;
PDBTitle: crystal structure of the de novo designed fluorinated peptide2 alpha4f3a

Phyre2

PDB 3twf chain B

3D model

Region: 17 - 26
Aligned: 10
Modelled: 10
Confidence: 11.7%
Identity: 60%
PDB header:unknown function
Chain: B: PDB Molecule:alpha4f3a;
PDBTitle: crystal structure of the de novo designed fluorinated peptide2 alpha4f3a

Phyre2

PDB 1ixs chain B domain 1

3D model

Region: 25 - 61
Aligned: 37
Modelled: 37
Confidence: 11.3%
Identity: 30%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Helicase DNA-binding domain

Phyre2
1
c3zf7S_
2
c3qoqC_
3
c2hjnA_
4
d1ixrc1
5
d1in4a1
6
c3j39S_
7
c2v6xB_
8
c3nr5A_
9
d1rk8b_
10
c1t0fC_
11
d1mnta_
12
c3pcqX_
13
c1yewF_
14
c3di3A_
15
c3j3bS_
16
c1u9pA_
17
c3izcS_
18
c3twfA_
19
c3twfB_
20
d1ixsb1
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3zf7S_
22.9 34 PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
2c3qoqC_
20.2 54 PDB header:transcription/dna
Chain: C: PDB Molecule:alginate and motility regulator z;
PDBTitle: crystal structure of the transcription factor amrz in complex with the2 18 base pair amrz1 binding site
3c2hjnA_
17.1 13 PDB header:cell cycle
Chain: A: PDB Molecule:maintenance of ploidy protein mob1;
PDBTitle: structural and functional analysis of saccharomyces2 cerevisiae mob1
4d1ixrc1
17.0 30 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
5d1in4a1
15.4 30 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
6c3j39S_
15.2 26 PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
7c2v6xB_
14.3 55 PDB header:protein transport
Chain: B: PDB Molecule:doa4-independent degradation protein 4;
PDBTitle: stractural insight into the interaction between escrt-iii2 and vps4
8c3nr5A_
14.2 41 PDB header:transcription
Chain: A: PDB Molecule:repressor of rna polymerase iii transcription maf1 homolog;
PDBTitle: crystal structure of human maf1
9d1rk8b_
13.8 40 Fold:Mago nashi protein
Superfamily:Mago nashi protein
Family:Mago nashi protein
10c1t0fC_
13.7 24 PDB header:dna binding protein
Chain: C: PDB Molecule:transposon tn7 transposition protein tnsc;
PDBTitle: crystal structure of the tnsa/tnsc(504-555) complex
11d1mnta_
13.1 31 Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Arc/Mnt-like phage repressors
12c3pcqX_
12.7 15 PDB header:photosynthesis
Chain: X: PDB Molecule:photosystem i 4.8k protein;
PDBTitle: femtosecond x-ray protein nanocrystallography
13c1yewF_
12.6 15 PDB header:oxidoreductase, membrane protein
Chain: F: PDB Molecule:particulate methane monooxygenase, a subunit;
PDBTitle: crystal structure of particulate methane monooxygenase
14c3di3A_
12.4 26 PDB header:cytokine/cytokine receptor
Chain: A: PDB Molecule:interleukin-7;
PDBTitle: crystal structure of the complex of human interleukin-7 with2 glycosylated human interleukin-7 receptor alpha ectodomain
15c3j3bS_
12.4 29 PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l18a;
PDBTitle: structure of the human 60s ribosomal proteins
16c1u9pA_
12.2 27 PDB header:unknown function
Chain: A: PDB Molecule:parc;
PDBTitle: permuted single-chain arc
17c3izcS_
12.1 26 PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein rpl20 (l18ae);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
18c3twfA_
11.7 60 PDB header:unknown function
Chain: A: PDB Molecule:alpha4f3a;
PDBTitle: crystal structure of the de novo designed fluorinated peptide2 alpha4f3a
19c3twfB_
11.7 60 PDB header:unknown function
Chain: B: PDB Molecule:alpha4f3a;
PDBTitle: crystal structure of the de novo designed fluorinated peptide2 alpha4f3a
20d1ixsb1
11.3 30 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
21c3chxF_
not modelled 10.8 15 PDB header:membrane protein
Chain: F: PDB Molecule:pmoa;
PDBTitle: crystal structure of methylosinus trichosporium ob3b2 particulate methane monooxygenase (pmmo)
22c3tweA_
not modelled 9.9 67 PDB header:unknown function
Chain: A: PDB Molecule:alpha4h;
PDBTitle: crystal structure of the de novo designed peptide alpha4h
23c1ho7A_
not modelled 9.8 47 PDB header:membrane protein
Chain: A: PDB Molecule:voltage-gated potassium channel protein;
PDBTitle: nmr structure of the potassium channel fragment l45 in tfe
24c1ho2A_
not modelled 9.8 47 PDB header:membrane protein
Chain: A: PDB Molecule:voltage-gated potassium channel protein;
PDBTitle: nmr structure of the potassium channel fragment l45 in2 micelles
25c3tweB_
not modelled 9.6 67 PDB header:unknown function
Chain: B: PDB Molecule:alpha4h;
PDBTitle: crystal structure of the de novo designed peptide alpha4h
26d2gaxa1
not modelled 9.5 34 Fold:Peptidyl-tRNA hydrolase II
Superfamily:Peptidyl-tRNA hydrolase II
Family:Peptidyl-tRNA hydrolase II
27c3o27B_
not modelled 9.5 29 PDB header:dna binding protein
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of c68 from the hybrid virus-plasmid pssvx
28c4a19X_
not modelled 9.3 13 PDB header:ribosome
Chain: X: PDB Molecule:rpl18a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 26s rrna and3 proteins of molecule 2.
29c3jtgA_
not modelled 9.1 33 PDB header:transcription
Chain: A: PDB Molecule:ets-related transcription factor elf-3;
PDBTitle: crystal structure of mouse elf3 c-terminal dna-binding domain in2 complex with type ii tgf-beta receptor promoter dna
30d2j0sc1
not modelled 8.9 45 Fold:Mago nashi protein
Superfamily:Mago nashi protein
Family:Mago nashi protein
31c4fe1X_
not modelled 8.8 15 PDB header:photosynthesis
Chain: X: PDB Molecule:photosystem i 4.8k protein;
PDBTitle: improving the accuracy of macromolecular structure refinement at 7 a2 resolution
32c1jb0X_
not modelled 8.8 15 PDB header:photosynthesis
Chain: X: PDB Molecule:photosystem i subunit psax;
PDBTitle: crystal structure of photosystem i: a photosynthetic reaction center2 and core antenna system from cyanobacteria
33d1jb0x_
not modelled 8.8 15 Fold:Single transmembrane helix
Superfamily:Subunit PsaX of photosystem I reaction centre
Family:Subunit PsaX of photosystem I reaction centre
34c2bbdA_
not modelled 8.8 40 PDB header:viral protein
Chain: A: PDB Molecule:coat protein;
PDBTitle: crystal structure of the stiv mcp
35c1kyqC_
not modelled 8.7 31 PDB header:oxidoreductase, lyase
Chain: C: PDB Molecule:siroheme biosynthesis protein met8;
PDBTitle: met8p: a bifunctional nad-dependent dehydrogenase and2 ferrochelatase involved in siroheme synthesis.
36c3zpyB_
not modelled 8.5 24 PDB header:lyase
Chain: B: PDB Molecule:alginate lyase, family pl7;
PDBTitle: crystal structure of the marine pl7 alginate lyase alya12 from zobellia galactanivorans
37c4gd3B_
not modelled 8.4 12 PDB header:oxidoreductase/electron transport
Chain: B: PDB Molecule:ni/fe-hydrogenase 1 b-type cytochrome subunit;
PDBTitle: structure of e. coli hydrogenase-1 in complex with cytochrome b
38c4gd3A_
not modelled 8.4 12 PDB header:oxidoreductase/electron transport
Chain: A: PDB Molecule:ni/fe-hydrogenase 1 b-type cytochrome subunit;
PDBTitle: structure of e. coli hydrogenase-1 in complex with cytochrome b
39c3izci_
not modelled 8.4 38 PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein rpl10 (l10e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
40c2islB_
not modelled 8.1 29 PDB header:flavoprotein
Chain: B: PDB Molecule:blub;
PDBTitle: blub bound to reduced flavin (fmnh2) and molecular oxygen.2 (clear crystal form)
41c3iz5i_
not modelled 8.0 38 PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein l10 (l10e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
42c1nybA_
not modelled 7.9 36 PDB header:transcription/rna
Chain: A: PDB Molecule:probable regulatory protein n;
PDBTitle: solution structure of the bacteriophage phi21 n peptide-boxb2 rna complex
43c3lw6A_
not modelled 7.8 63 PDB header:transferase
Chain: A: PDB Molecule:beta-4-galactosyltransferase 7;
PDBTitle: crystal structure of drosophila beta1,4-galactosyltransferase-7
44d1b9ha_
not modelled 7.4 17 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
45d1oe4a_
not modelled 6.8 26 Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
46d1kqfc_
not modelled 6.8 18 Fold:Heme-binding four-helical bundle
Superfamily:Transmembrane di-heme cytochromes
Family:Formate dehydrogenase N, cytochrome (gamma) subunit
47d2frea1
not modelled 6.8 25 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
48d1jvra_
not modelled 6.8 23 Fold:Retroviral matrix proteins
Superfamily:Retroviral matrix proteins
Family:HTLV-II matrix protein
49c3a0hJ_
not modelled 6.7 21 PDB header:electron transport
Chain: J: PDB Molecule:photosystem ii reaction center protein j;
PDBTitle: crystal structure of i-substituted photosystem ii complex
50d2axtj1
not modelled 6.7 21 Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein J, PsbJ
Family:PsbJ-like
51c3j3bg_
not modelled 6.6 25 PDB header:ribosome
Chain: G: PDB Molecule:60s ribosomal protein l7a;
PDBTitle: structure of the human 60s ribosomal proteins
52d2iu5a2
not modelled 6.5 25 Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
53d3cx5d2
not modelled 6.4 50 Fold:Single transmembrane helix
Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
54d1ppjd2
not modelled 6.2 63 Fold:Single transmembrane helix
Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
55c2zkrq_
not modelled 6.1 20 PDB header:ribosomal protein/rna
Chain: Q: PDB Molecule:rna expansion segment es31 part ii;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
56c3ge5A_
not modelled 6.1 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h:fmn oxidoreductase;
PDBTitle: crystal structure of a putative nad(p)h:fmn oxidoreductase (pg0310)2 from porphyromonas gingivalis w83 at 1.70 a resolution
57c1ckkB_
not modelled 6.1 25 PDB header:calmodulin-peptide complex
Chain: B: PDB Molecule:protein (rat ca2+/calmodulin dependent protein
PDBTitle: calmodulin/rat ca2+/calmodulin dependent protein kinase2 fragment
58d1pv0a_
not modelled 6.0 27 Fold:Long alpha-hairpin
Superfamily:Sporulation inhibitor Sda
Family:Sporulation inhibitor Sda
59d2e74f1
not modelled 5.9 46 Fold:Single transmembrane helix
Superfamily:PetM subunit of the cytochrome b6f complex
Family:PetM subunit of the cytochrome b6f complex
60c3u5eS_
not modelled 5.9 37 PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l20-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 60s subunit, ribosome a
61c3j21d_
not modelled 5.9 36 PDB header:ribosome
Chain: D: PDB Molecule:50s ribosomal protein l4p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
62c3bemA_
not modelled 5.9 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h nitroreductase ydfn;
PDBTitle: crystal structure of putative nitroreductase ydfn (2632848) from2 bacillus subtilis at 1.65 a resolution
63c1q2iA_
not modelled 5.8 40 PDB header:antitumor protein
Chain: A: PDB Molecule:pnc27;
PDBTitle: nmr solution structure of a peptide from the mdm-2 binding2 domain of the p53 protein that is selectively cytotoxic to3 cancer cells
64c3ho5B_
not modelled 5.8 69 PDB header:signaling protein
Chain: B: PDB Molecule:hedgehog-interacting protein;
PDBTitle: crystal structure of hedgehog-interacting protein (hhip) and sonic2 hedgehog (shh) complex
65d1dp7p_
not modelled 5.7 15 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:P4 origin-binding domain-like
66d1ef5a_
not modelled 5.6 40 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
67d1k8ib2
not modelled 5.6 32 Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
68c2ebyA_
not modelled 5.6 12 PDB header:transcription
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq;
PDBTitle: crystal structure of a hypothetical protein from e. coli
69c4a19L_
not modelled 5.2 44 PDB header:ribosome
Chain: L: PDB Molecule:rpl34;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 26s rrna and3 proteins of molecule 2.
70c2kpmA_
not modelled 5.2 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of uncharacterized protein from gene2 locus ne0665 of nitrosomonas europaea. northeast structural3 genomics target ner103a
71c3j39g_
not modelled 5.1 58 PDB header:ribosome
Chain: G: PDB Molecule:60s ribosomal protein l7a;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
72d2jxta1
not modelled 5.1 21 Fold:RplX-like
Superfamily:RplX-like
Family:RplX-like
73c2zuuA_
not modelled 5.1 38 PDB header:transferase
Chain: A: PDB Molecule:lacto-n-biose phosphorylase;
PDBTitle: crystal structure of galacto-n-biose/lacto-n-biose i phosphorylase in2 complex with glcnac
74c3mtvA_
not modelled 5.1 22 PDB header:hydrolase
Chain: A: PDB Molecule:papain-like cysteine protease;
PDBTitle: the crystal structure of the prrsv nonstructural protein nsp1
75c1ujwB_
not modelled 5.1 44 PDB header:transport protein/hydrolase
Chain: B: PDB Molecule:colicin e3;
PDBTitle: structure of the complex between btub and colicin e3 receptor binding2 domain

Binding site prediction 

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