PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zkrq_

Fold library id	PDB Header	Molecule	Title
c2zkrq_	PDB header: ribosomal protein/rna	Chain: Q: PDB Molecule: rna expansion segment es31 part ii;	PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map

Links to external resources
Added to library: Tue Mar 16 12:07:30 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T K G K R R G T R Y M F S R P F R K H G V V P L A T Y M R I Y K K G D I V D I K G M G T V Q K G M P H K C Y H G K T G R V Y N V T Q H A V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T
S
T T T
S
T T
T T
S S
G G G T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . .

Sequence I I V N K Q V K G K I L A K R I N V R I E H I K H S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	G	K	R	R	G	T	R	Y	M	F	S	R	P	F	R	K	H	G	V	V	P	L	A	T	Y	M	R	I	Y	K	K	G	D	I	V	D	I	K	G	M	G	T	V	Q	K	G	M	P	H	K	C	Y	H	G	K	T	G	R	V	Y	N	V	T	Q	H	A	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	T	T						S			T	T	T		S													T	T									T	T			S	S				G	G	G	T	T										S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Sequence	I	I	V	N	K	Q	V	K	G	K	I	L	A	K	R	I	N	V	R	I	E	H	I	K	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			S								G	G	G