PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2islB_

Fold library id	PDB Header	Molecule	Title
c2islB_	PDB header: flavoprotein	Chain: B: PDB Molecule: blub;	PDBTitle: blub bound to reduced flavin (fmnh2) and molecular oxygen.2 (clear crystal form)

Links to external resources
Added to library: Tue Mar 16 14:06:03 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L T A A G A F S S D E R A A V Y R A I E T R R D V R D E F L P E P L S E E L I A R L L G A A H Q A P S V G F M Q P W N F V L V R Q D E T R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
S S
T T S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V W Q A F Q R A N D E A A E M F S G E R Q A K Y R S L K L E G I R K A P L S I C V T C D R T R G G A V V L G R T H N P Q M D L Y S T V C A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T S
T T T S S T T
S
S
S S T T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V Q N L W L A A R A E G V G V G W V S I F H E S E I K A I L G I P D H V E I V A W L C L G F V D R L Y Q E P E L A A K G W R Q R L P L E D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
T T
S
S S
T T S
G G G T

. . . . . . . . .

Sequence V F E E G W G V R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	T	A	A	G	A	F	S	S	D	E	R	A	A	V	Y	R	A	I	E	T	R	R	D	V	R	D	E	F	L	P	E	P	L	S	E	E	L	I	A	R	L	L	G	A	A	H	Q	A	P	S	V	G	F	M	Q	P	W	N	F	V	L	V	R	Q	D	E	T	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								B		S	S				S	S															T	T	S			G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	W	Q	A	F	Q	R	A	N	D	E	A	A	E	M	F	S	G	E	R	Q	A	K	Y	R	S	L	K	L	E	G	I	R	K	A	P	L	S	I	C	V	T	C	D	R	T	R	G	G	A	V	V	L	G	R	T	H	N	P	Q	M	D	L	Y	S	T	V	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S									T	T	S					T	T	T	S	S									T	T		S		S			S	S	T	T	T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	Q	N	L	W	L	A	A	R	A	E	G	V	G	V	G	W	V	S	I	F	H	E	S	E	I	K	A	I	L	G	I	P	D	H	V	E	I	V	A	W	L	C	L	G	F	V	D	R	L	Y	Q	E	P	E	L	A	A	K	G	W	R	Q	R	L	P	L	E	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T									S										T			T	T													S				S	S						T	T	S						G	G	G	T
	.	.	.	.	.	.	.	.	.
Sequence	V	F	E	E	G	W	G	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	T	T