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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zpyB_

Fold library idPDB HeaderMoleculeTitle
c3zpyB_PDB header: lyaseChain: B: PDB Molecule: alginate lyase, family pl7;PDBTitle: crystal structure of the marine pl7 alginate lyase alya12 from zobellia galactanivorans


Added to library: Sat Jun 29 08:23:39 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSPASVLGITANTWKINSFIGSPGSSATYYDDITDASGISYNTYSDDNYFYTDGEWVYFKCYRGLGGSAN
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Known secondary structure (DSSP)

T

TTTSSSSTT
SSGGGSTT

TTT

BTTT
SS
TTTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SQNPRVELREMDNGNLASWTGDSGTHTMEWTVQVNQLPQDTDGDGGVLCFGQIHGPSKNSDGVEVDDVVR
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Known secondary structure (DSSP)
S

TT

B
TTSS



TTSS


SS
TT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VQFIGEENQSSGSVKLKISGYVTEEQGGSQTFSGYSLDTTYNCKLVYSGGYVELFMNGSSVFRKKMEVDD
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Known secondary structure (DSSP) STT

SSSTTT

TT

TTTT


S
 .........220.........230.........240.......
Sequence LSENYFKVGNYLQSVKGASYTGSYGLVRIKNLSVTHN
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Known secondary structure (DSSP)

SB
S
TT


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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