Email l.a.kelley@imperial.ac.uk Description P46855 Date Thu Jan 5 12:04:27 GMT 2012 Unique Job ID fa6487f34d8f26af

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3he1F_ 100.0 28 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:major exported hcp3 protein; PDBTitle: secreted protein hcp3 from pseudomonas aeruginosa. 2 d1y12a1 100.0 17 Fold:Hcp1-like Superfamily:Hcp1-like Family:Hcp1-like 3 c3v4hA_ 100.0 17 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a type vi secretion system effector from yersinia2 pestis 4 c3eaaB_ 100.0 10 PDB header:unknown function Chain: B: PDB Molecule:evpc; PDBTitle: structure of a type six secretion system protein 5 d2gykb1 99.7 32 Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:HNH-motif 6 d2jb0b1 97.8 31 Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:HNH-motif 7 c7ceiB_ 97.7 28 PDB header:immune system Chain: B: PDB Molecule:protein (colicin e7 immunity protein); PDBTitle: the endonuclease domain of colicin e7 in complex with its inhibitor2 im7 protein 8 c2qgpA_ 92.5 23 PDB header:hydrolase Chain: A: PDB Molecule:hnh endonuclease; PDBTitle: x-ray structure of the nhn endonuclease from geobacter2 metallireducens. northeast structural genomics consortium3 target gmr87. 9 c2joxA_ 64.6 24 PDB header:transcription Chain: A: PDB Molecule:churchill protein; PDBTitle: embryonic neural inducing factor churchill is not a dna-2 binding zinc finger protein: solution structure reveals a3 solvent-exposed beta-sheet and zinc binuclear cluster 10 d1n9pa_ 59.7 20 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Cytoplasmic domain of inward rectifier potassium channel 11 c1u3eM_ 48.2 22 PDB header:dna binding protein/dna Chain: M: PDB Molecule:hnh homing endonuclease; PDBTitle: dna binding and cleavage by the hnh homing endonuclease i-hmui 12 c2gq1A_ 43.5 26 PDB header:hydrolase Chain: A: PDB Molecule:fructose-1,6-bisphosphatase; PDBTitle: crystal structure of recombinant type i fructose-1,6-bisphosphatase2 from escherichia coli complexed with sulfate ions 13 d1xl4a1 41.6 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Cytoplasmic domain of inward rectifier potassium channel 14 c1u4fD_ 27.9 40 PDB header:allergen Chain: D: PDB Molecule:inward rectifier potassium channel 2; PDBTitle: crystal structure of cytoplasmic domains of irk1 (kir2.1)2 channel 15 c2gixC_ 27.3 43 PDB header:metal transport Chain: C: PDB Molecule:inward rectifier potassium channel 2; PDBTitle: cytoplasmic domain structure of kir2.1 containing2 andersen's mutation r218q and rescue mutation t309k 16 d1bk4a_ 27.0 25 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 17 d1nuwa_ 26.8 23 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 18 c2xkyI_ 26.0 43 PDB header:metal transport Chain: I: PDB Molecule:inward rectifier potassium channel 2; PDBTitle: single particle analysis of kir2.1nc_4 in negative stain 19 c2e4fA_ 25.0 12 PDB header:transport protein Chain: A: PDB Molecule:g protein-activated inward rectifier potassium channel 2; PDBTitle: crystal structure of the cytoplasmic domain of g-protein-gated inward2 rectifier potassium channel kir3.2 20 d1ftaa_ 24.5 23 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 21 c2fhyL_ not modelled 24.2 23 PDB header:hydrolase Chain: L: PDB Molecule:fructose-1,6-bisphosphatase 1; PDBTitle: structure of human liver fpbase complexed with a novel2 benzoxazole as allosteric inhibitor 22 d2ouwa1 not modelled 22.8 13 Fold:AhpD-like Superfamily:AhpD-like Family:TTHA0727-like 23 d1p7ba1 not modelled 20.3 43 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Cytoplasmic domain of inward rectifier potassium channel 24 d1u3em1 not modelled 18.5 17 Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:Intron-encoded homing endonucleases 25 d1ne9a1 not modelled 18.3 17 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:FemXAB nonribosomal peptidyltransferases 26 c3jycA_ not modelled 15.8 17 PDB header:metal transport Chain: A: PDB Molecule:inward-rectifier k+ channel kir2.2; PDBTitle: crystal structure of the eukaryotic strong inward-rectifier2 k+ channel kir2.2 at 3.1 angstrom resolution 27 d1skye2 not modelled 15.8 29 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase 28 c2qp2A_ not modelled 15.5 21 PDB header:unknown function Chain: A: PDB Molecule:unknown protein; PDBTitle: structure of a macpf/perforin-like protein 29 c3cfhB_ not modelled 14.9 18 PDB header:fluorescent protein Chain: B: PDB Molecule:gfp-like photoswitchable fluorescent protein; PDBTitle: photoswitchable red fluorescent protein psrfp, off-state 30 c2gw4D_ not modelled 14.8 21 PDB header:luminescent protein Chain: D: PDB Molecule:kaede; PDBTitle: crystal structure of stony coral fluorescent protein kaede, red form 31 c1zggA_ not modelled 13.7 12 PDB header:hydrolase Chain: A: PDB Molecule:putative low molecular weight protein-tyrosine- PDBTitle: solution structure of a low molecular weight protein2 tyrosine phosphatase from bacillus subtilis 32 c2otbB_ not modelled 13.5 21 PDB header:fluorescent protein Chain: B: PDB Molecule:gfp-like fluorescent chromoprotein cfp484; PDBTitle: crystal structure of a monomeric cyan fluorescent protein2 in the fluorescent state 33 c1p7bB_ not modelled 13.3 47 PDB header:metal transport Chain: B: PDB Molecule:integral membrane channel and cytosolic domains; PDBTitle: crystal structure of an inward rectifier potassium channel 34 c3lf4B_ not modelled 13.3 21 PDB header:fluorescent protein Chain: B: PDB Molecule:fluorescent timer precursor blue102; PDBTitle: crystal structure of fluorescent timer precursor blue102 35 c2y7cA_ not modelled 12.7 25 PDB header:transferase Chain: A: PDB Molecule:type-1 restriction enzyme ecoki specificity protein; PDBTitle: atomic model of the ocr-bound methylase complex from the2 type i restriction-modification enzyme ecoki (m2s1). based3 on fitting into em map 1534. 36 d2fzta1 not modelled 12.3 26 Fold:Methionine synthase domain-like Superfamily:TM0693-like Family:TM0693-like 37 c2zo6A_ not modelled 11.8 29 PDB header:luminescent protein Chain: A: PDB Molecule:cyan-emitting gfp-like protein, kusabira-cyan (kcy); PDBTitle: crystal structure of kusabira-cyan (kcy), a cyan-emitting gfp-like2 protein 38 d1xqma_ not modelled 11.4 18 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 39 c2g3dB_ not modelled 11.4 21 PDB header:luminescent protein Chain: B: PDB Molecule:green fluorescent protein; PDBTitle: structure of s65g y66a gfp variant after spontaneous2 peptide hydrolysis 40 c2ddcA_ not modelled 11.4 29 PDB header:luminescent protein Chain: A: PDB Molecule:photoconvertible fluorescent protein; PDBTitle: unique behavior of a histidine responsible for an2 engineered green-to-red photoconversion process 41 d1ggxa_ not modelled 11.1 21 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 42 d1d9qa_ not modelled 10.9 20 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 43 c3l4hA_ not modelled 10.9 16 PDB header:protein binding Chain: A: PDB Molecule:e3 ubiquitin-protein ligase hecw1; PDBTitle: helical box domain and second ww domain of the human e3 ubiquitin-2 protein ligase hecw1 44 c2zmwC_ not modelled 10.8 25 PDB header:luminescent protein Chain: C: PDB Molecule:fluorescent protein; PDBTitle: crystal structure of monomeric kusabira-orange (mko),2 orange-emitting gfp-like protein, at ph 6.0 45 d1spia_ not modelled 10.7 24 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 46 c2c9jG_ not modelled 10.7 25 PDB header:luminescent protein Chain: G: PDB Molecule:green fluorescent protein fp512; PDBTitle: structure of the fluorescent protein cmfp512 at 1.35a from2 cerianthus membranaceus 47 d1fc2c_ not modelled 10.4 22 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 48 c2zo7A_ not modelled 10.3 29 PDB header:luminescent protein Chain: A: PDB Molecule:cyan/green-emitting gfp-like protein, kusabira-cyan mutant PDBTitle: crystal structure of a kusabira-cyan mutant (kcy-r1), a cyan/green-2 emitting gfp-like protein 49 c1olpB_ not modelled 10.3 17 PDB header:hydrolase Chain: B: PDB Molecule:alpha-toxin; PDBTitle: alpha toxin from clostridium absonum 50 c2g9lA_ not modelled 10.2 38 PDB header:antibiotic Chain: A: PDB Molecule:gaegurin-4; PDBTitle: the high-resolution solution conformation of an2 antimicrobial peptide gaegurin 4 and its mode of membrane3 interaction 51 d2rh7a1 not modelled 10.0 21 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 52 c3cglE_ not modelled 10.0 21 PDB header:fluorescent protein Chain: E: PDB Molecule:gfp-like fluorescent chromoprotein dsfp483; PDBTitle: crystal structure and raman studies of dsfp483, a cyan fluorescent2 protein from discosoma striata 53 c1yzwB_ not modelled 9.9 18 PDB header:luminescent protein Chain: B: PDB Molecule:gfp-like non-fluorescent chromoprotein; PDBTitle: the 2.1a crystal structure of the far-red fluorescent2 protein hcred: inherent conformational flexibility of the3 chromophore 54 c2bjqA_ not modelled 9.8 15 PDB header:motility Chain: A: PDB Molecule:mfp2a; PDBTitle: crystal structure of the nematode sperm cell motility2 protein mfp2 55 c3gb3B_ not modelled 9.7 7 PDB header:fluorescent protein Chain: B: PDB Molecule:killerred; PDBTitle: x-ray structure of genetically encoded photosensitizer2 killerred in native form 56 c3simA_ not modelled 9.4 25 PDB header:hydrolase Chain: A: PDB Molecule:protein, family 18 chitinase; PDBTitle: crystallographic structure analysis of family 18 chitinase from crocus2 vernus 57 c2kxhB_ not modelled 9.0 64 PDB header:protein binding Chain: B: PDB Molecule:peptide of far upstream element-binding protein 1; PDBTitle: solution structure of the first two rrm domains of fir in the complex2 with fbp nbox peptide 58 c3myuB_ not modelled 8.8 20 PDB header:vib binding protein Chain: B: PDB Molecule:high affinity transport system protein p37; PDBTitle: mycoplasma genitalium mg289 59 c3sggA_ not modelled 8.8 36 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical hydrolase; PDBTitle: crystal structure of a hypothetical hydrolase (bt_2193) from2 bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution 60 c2y50A_ not modelled 8.7 23 PDB header:hydrolase Chain: A: PDB Molecule:collagenase; PDBTitle: crystal structure of collagenase g from clostridium2 histolyticum at 2.80 angstrom resolution 61 c2c9iG_ not modelled 8.7 18 PDB header:luminescent protein Chain: G: PDB Molecule:green fluorescent protein asfp499; PDBTitle: structure of the fluorescent protein asfp499 from anemonia2 sulcata 62 c2ib5H_ not modelled 8.7 14 PDB header:luminescent protein Chain: H: PDB Molecule:chromo protein; PDBTitle: structural characterization of a blue chromoprotein and its yellow2 mutant from the sea anemone cnidopus japonicus 63 c2z6zA_ not modelled 8.6 25 PDB header:fluorescent protein Chain: A: PDB Molecule:fluorescent protein dronpa; PDBTitle: crystal structure of a photoswitchable gfp-like protein2 dronpa in the bright-state 64 c2xfyA_ not modelled 8.5 21 PDB header:hydrolase Chain: A: PDB Molecule:beta-amylase; PDBTitle: crystal structure of barley beta-amylase complexed with2 alpha-cyclodextrin 65 d1moua_ not modelled 8.4 21 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 66 c2icrD_ not modelled 8.4 25 PDB header:fluorescent protein Chain: D: PDB Molecule:red fluorescent protein zoanrfp; PDBTitle: red fluorescent protein zrfp574 from zoanthus sp. 67 c2hpwA_ not modelled 8.3 21 PDB header:luminescent protein Chain: A: PDB Molecule:green fluorescent protein; PDBTitle: green fluorescent protein from clytia gregaria 68 c3eplA_ not modelled 8.3 17 PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism 69 d1deeg_ not modelled 8.2 22 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 70 c1amlA_ not modelled 8.1 50 PDB header:serine protease inhibitor Chain: A: PDB Molecule:amyloid a4; PDBTitle: the alzheimer`s disease amyloid a4 peptide (residues 1-40) 71 d2jwda1 not modelled 7.8 22 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 72 c3nezB_ not modelled 7.8 21 PDB header:fluorescent protein Chain: B: PDB Molecule:mrojoa; PDBTitle: mrojoa 73 d1uisa_ not modelled 7.7 18 Fold:GFP-like Superfamily:GFP-like Family:Fluorescent proteins 74 d2cwqa1 not modelled 7.5 14 Fold:AhpD-like Superfamily:AhpD-like Family:TTHA0727-like 75 c3uksB_ not modelled 7.5 17 PDB header:hydrolase Chain: B: PDB Molecule:sedoheptulose-1,7 bisphosphatase, putative; PDBTitle: 1.85 angstrom crystal structure of putative sedoheptulose-1,72 bisphosphatase from toxoplasma gondii 76 d1hcra_ not modelled 7.1 63 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 77 d1ijwc_ not modelled 7.1 63 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 78 c2y6xA_ not modelled 7.0 19 PDB header:photosynthesis Chain: A: PDB Molecule:photosystem ii 11 kd protein; PDBTitle: structure of psb27 from thermosynechococcus elongatus 79 c3t7hB_ not modelled 6.9 19 PDB header:ligase Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: atg8 transfer from atg7 to atg3: a distinctive e1-e2 architecture and2 mechanism in the autophagy pathway 80 d1t3la2 not modelled 6.8 29 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 81 d1x9aa_ not modelled 6.7 22 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrH-like 82 d1lrza1 not modelled 6.7 35 Fold:Long alpha-hairpin Superfamily:tRNA-binding arm Family:Methicillin resistance protein FemA probable tRNA-binding arm 83 d1khoa2 not modelled 6.6 21 Fold:Lipase/lipooxygenase domain (PLAT/LH2 domain) Superfamily:Lipase/lipooxygenase domain (PLAT/LH2 domain) Family:Alpha-toxin, C-terminal domain 84 d1lp1b_ not modelled 6.6 22 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Bacterial immunoglobulin/albumin-binding domains Family:Immunoglobulin-binding protein A modules 85 d1vyva2 not modelled 6.4 29 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 86 d1vyua2 not modelled 6.3 26 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 87 d1saza1 not modelled 6.2 29 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Acetokinase-like 88 c2qksA_ not modelled 6.2 19 PDB header:metal transport Chain: A: PDB Molecule:kir3.1-prokaryotic kir channel chimera; PDBTitle: crystal structure of a kir3.1-prokaryotic kir channel chimera 89 d2pstx1 not modelled 6.2 20 Fold:MbtH/L9 domain-like Superfamily:MbtH-like Family:MbtH-like 90 c3nezA_ not modelled 6.2 16 PDB header:fluorescent protein Chain: A: PDB Molecule:mrojoa; PDBTitle: mrojoa 91 c3d3qB_ not modelled 6.0 12 PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 92 c1y2iC_ not modelled 6.0 39 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein s0862; PDBTitle: crystal structure of mcsg target apc27401 from shigella2 flexneri 93 d1y2ia_ not modelled 6.0 39 Fold:Dodecin subunit-like Superfamily:YbjQ-like Family:YbjQ-like 94 d1ogmx1 not modelled 6.0 28 Fold:Dextranase, N-terminal domain Superfamily:Dextranase, N-terminal domain Family:Dextranase, N-terminal domain 95 c3akoG_ not modelled 6.0 24 PDB header:fluorescent protein Chain: G: PDB Molecule:venus; PDBTitle: crystal structure of the reassembled venus 96 c2yicC_ not modelled 5.7 12 PDB header:lyase Chain: C: PDB Molecule:2-oxoglutarate decarboxylase; PDBTitle: crystal structure of the suca domain of mycobacterium smegmatis2 alpha-ketoglutarate decarboxylase (triclinic form) 97 c2okrC_ not modelled 5.6 38 PDB header:transferase Chain: C: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer 98 c2okrF_ not modelled 5.6 38 PDB header:transferase Chain: F: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer 99 c3nb0A_ not modelled 5.5 19 PDB header:transferase Chain: A: PDB Molecule:glycogen [starch] synthase isoform 2; PDBTitle: glucose-6-phosphate activated form of yeast glycogen synthase