PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1yzwB_

Fold library id	PDB Header	Molecule	Title
c1yzwB_	PDB header: luminescent protein	Chain: B: PDB Molecule: gfp-like non-fluorescent chromoprotein;	PDBTitle: the 2.1a crystal structure of the far-red fluorescent2 protein hcred: inherent conformational flexibility of the3 chromophore

Links to external resources
Added to library: Tue Mar 16 13:52:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G L L K E S M R I K M Y M E G T V N G H Y F K C E G E G D G N P F A G T Q S M R I H V T E G A P L P F A F D I L A P C C S R T F V H H T A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T T T T T T S
S
S S
G G G T G G G
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I P D F F K Q S F P E G F T W E R T T T Y E D G G I L T A H Q D T S L E G N C L I Y K V K V H G T N F P A D G P V M K N K S G G W E P S T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S
T T
T T S T T T T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V V Y P E N G V L C G R N V M A L K V G D R H L I C H H Y T S Y R S K K A V R A L T M P G F H F T D I R L Q M L R K K K D E Y F E L Y E A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S S
G G G
S T T T

. . . . . . . . . 220

Sequence V A R Y S D L P E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	L	L	K	E	S	M	R	I	K	M	Y	M	E	G	T	V	N	G	H	Y	F	K	C	E	G	E	G	D	G	N	P	F	A	G	T	Q	S	M	R	I	H	V	T	E	G	A	P	L	P	F	A	F	D	I	L	A	P	C	C	S	R	T	F	V	H	H	T	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S												T	T													T	T	T	T											S		S		S	S		G	G	G	T	G	G	G			T	T						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	P	D	F	F	K	Q	S	F	P	E	G	F	T	W	E	R	T	T	T	Y	E	D	G	G	I	L	T	A	H	Q	D	T	S	L	E	G	N	C	L	I	Y	K	V	K	V	H	G	T	N	F	P	A	D	G	P	V	M	K	N	K	S	G	G	W	E	P	S	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T											T	T	S													T	T															T	T	S	T	T	T	T	T					B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	V	Y	P	E	N	G	V	L	C	G	R	N	V	M	A	L	K	V	G	D	R	H	L	I	C	H	H	Y	T	S	Y	R	S	K	K	A	V	R	A	L	T	M	P	G	F	H	F	T	D	I	R	L	Q	M	L	R	K	K	K	D	E	Y	F	E	L	Y	E	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T													T	T														S	S		G	G	G						S														T	T	T
	.	.	.	.	.	.	.	.	.	220
Sequence	V	A	R	Y	S	D	L	P	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S