Email l.a.kelley@imperial.ac.uk Description P05042 Date Thu Jan 5 10:58:37 GMT 2012 Unique Job ID e72b0832986c4c85

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1j3ua_ 100.0 41 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 2 d1vdka_ 100.0 58 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 3 c1yfmA_ 100.0 59 PDB header:lyase Chain: A: PDB Molecule:fumarase; PDBTitle: recombinant yeast fumarase 4 d1yfma_ 100.0 59 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 5 d1fuoa_ 100.0 100 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 6 d1jswa_ 100.0 40 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 7 c3no9C_ 100.0 48 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis 8 c3ocfB_ 100.0 45 PDB header:lyase Chain: B: PDB Molecule:fumarate lyase:delta crystallin; PDBTitle: crystal structure of fumarate lyase:delta crystallin from brucella2 melitensis in native form 9 c3e04C_ 100.0 59 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase; PDBTitle: crystal structure of human fumarate hydratase 10 c3gtdB_ 100.0 56 PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii 11 d1jswc_ 100.0 41 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 12 c3r6yG_ 100.0 41 PDB header:lyase Chain: G: PDB Molecule:aspartase; PDBTitle: crystal structure of chymotrypsin-treated aspartase from bacillus sp.2 ym55-1 13 c2pfmA_ 100.0 19 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase (purb) from bacillus2 anthracis 14 d1tj7a_ 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 15 d1re5a_ 100.0 24 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 16 d1q5na_ 100.0 22 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 17 c2e9fC_ 100.0 24 PDB header:lyase Chain: C: PDB Molecule:argininosuccinate lyase; PDBTitle: crystal structure of t.th.hb8 argininosuccinate lyase complexed with2 l-arginine 18 d1c3ca_ 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 19 d1i0aa_ 100.0 21 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 20 d1tjva_ 100.0 21 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 21 d1hy0a_ not modelled 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 22 d1k62a_ not modelled 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 23 c3c8tA_ not modelled 100.0 22 PDB header:lyase Chain: A: PDB Molecule:fumarate lyase; PDBTitle: crystal structure of fumarate lyase from mesorhizobium sp. bnc1 24 c3bhgA_ not modelled 100.0 15 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase from legionella2 pneumophila 25 c2vd6B_ not modelled 100.0 17 PDB header:lyase Chain: B: PDB Molecule:adenylosuccinate lyase; PDBTitle: human adenylosuccinate lyase in complex with its substrate2 n6-(1,2-dicarboxyethyl)-amp, and its products amp and3 fumarate. 26 c2qgaC_ not modelled 100.0 16 PDB header:lyase Chain: C: PDB Molecule:adenylosuccinate lyase; PDBTitle: plasmodium vivax adenylosuccinate lyase pv003765 with amp bound 27 c2ptsA_ not modelled 100.0 15 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of wild type escherichia coli adenylosuccinate lyase 28 d1dofa_ not modelled 100.0 21 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 29 c1yisA_ not modelled 100.0 14 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: structural genomics of caenorhabditis elegans: adenylosuccinate lyase 30 c2fenA_ not modelled 100.0 21 PDB header:isomerase Chain: A: PDB Molecule:3-carboxy-cis,cis-muconate lactonizing enzyme; PDBTitle: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium2 radiobacter s2 31 d1f1oa_ not modelled 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 32 d1gkma_ not modelled 52.1 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:HAL/PAL-like 33 c3exmA_ not modelled 27.1 24 PDB header:hydrolase Chain: A: PDB Molecule:phosphatase sc4828; PDBTitle: crystal structure of the phosphatase sc4828 with the non-hydrolyzable2 nucleotide gpcp 34 c2xgvA_ not modelled 25.7 27 PDB header:viral protein Chain: A: PDB Molecule:psiv capsid n-terminal domain; PDBTitle: structure of the n-terminal domain of capsid protein from2 rabbit endogenous lentivirus (relik) 35 d1lbua1 not modelled 25.1 21 Fold:PGBD-like Superfamily:PGBD-like Family:Peptidoglycan binding domain, PGBD 36 d1h8ba_ not modelled 22.2 21 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 37 d2ce7a1 not modelled 20.5 21 Fold:FtsH protease domain-like Superfamily:FtsH protease domain-like Family:FtsH protease domain-like 38 d1e8ga1 not modelled 19.8 21 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:Vanillyl-alcohol oxidase-like 39 c2ctoA_ not modelled 19.8 42 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:novel protein; PDBTitle: solution structure of the hmg box like domain from human2 hypothetical protein flj14904 40 d1wvfa1 not modelled 19.3 16 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:Vanillyl-alcohol oxidase-like 41 c2di4B_ not modelled 19.1 17 PDB header:hydrolase Chain: B: PDB Molecule:cell division protein ftsh homolog; PDBTitle: crystal structure of the ftsh protease domain 42 d2di4a1 not modelled 18.5 16 Fold:FtsH protease domain-like Superfamily:FtsH protease domain-like Family:FtsH protease domain-like 43 c3bkhA_ not modelled 16.2 22 PDB header:hydrolase Chain: A: PDB Molecule:lytic transglycosylase; PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144 44 c3lq9B_ not modelled 15.7 21 PDB header:signaling protein Chain: B: PDB Molecule:dna-damage-inducible transcript 4 protein; PDBTitle: crystal strucure of human redd1, a hypoxia-induced regulator2 of mtor 45 c3bbnC_ not modelled 14.3 40 PDB header:ribosome Chain: C: PDB Molecule:ribosomal protein s3; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 46 c2zttA_ not modelled 12.8 20 PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase catalytic subunit; PDBTitle: crystal structure of rna polymerase pb1-pb2 subunits from2 influenza a virus 47 d3e9va1 not modelled 12.7 22 Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like 48 c3fbtB_ not modelled 11.6 20 PDB header:oxidoreductase, lyase Chain: B: PDB Molecule:chorismate mutase and shikimate 5-dehydrogenase PDBTitle: crystal structure of a chorismate mutase/shikimate 5-2 dehydrogenase fusion protein from clostridium3 acetobutylicum 49 c2ev9B_ not modelled 11.5 29 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate 50 c1byvA_ not modelled 10.7 30 PDB header:hormone/growth factor Chain: A: PDB Molecule:protein (calcitonin); PDBTitle: glycosylated eel calcitonin 51 d1nvta2 not modelled 10.7 13 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 52 d1npya2 not modelled 10.5 50 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 53 d1n7ka_ not modelled 9.8 20 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 54 c1htrP_ not modelled 9.2 14 PDB header:aspartyl protease Chain: P: PDB Molecule:progastricsin (pro segment); PDBTitle: crystal and molecular structures of human progastricsin at 1.622 angstroms resolution 55 d1vi2a2 not modelled 9.2 14 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 56 c1lbuA_ not modelled 8.8 18 PDB header:hydrolase Chain: A: PDB Molecule:muramoyl-pentapeptide carboxypeptidase; PDBTitle: hydrolase metallo (zn) dd-peptidase 57 d2z15a1 not modelled 8.4 13 Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like 58 c1wjvA_ not modelled 8.4 44 PDB header:dna binding protein Chain: A: PDB Molecule:cell growth regulating nucleolar protein lyar; PDBTitle: solution structure of the n-terminal zinc finger domain of2 mouse cell growth regulating nucleolar protein lyar 59 d1wjfa_ not modelled 8.3 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 60 c3m1eA_ not modelled 8.2 9 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd 61 d1k6ya1 not modelled 8.1 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 62 c1nvtA_ not modelled 8.0 13 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ 63 c3no7A_ not modelled 7.9 19 PDB header:dna binding protein Chain: A: PDB Molecule:putative plasmid related protein; PDBTitle: crystal structure of the centromere-binding protein parb from plasmid2 pcxc100 64 d1e0ea_ not modelled 7.8 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 65 c1yrlD_ not modelled 7.8 16 PDB header:oxidoreductase Chain: D: PDB Molecule:ketol-acid reductoisomerase; PDBTitle: escherichia coli ketol-acid reductoisomerase 66 d1rxqa_ not modelled 7.5 16 Fold:DinB/YfiT-like putative metalloenzymes Superfamily:DinB/YfiT-like putative metalloenzymes Family:YfiT-like putative metal-dependent hydrolases 67 d2qalc1 not modelled 7.1 38 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 68 d1p77a2 not modelled 7.1 14 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 69 c3pwzA_ not modelled 6.9 13 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida 70 d2b0ja1 not modelled 6.8 21 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:HMD dimerization domain-like 71 c2dxbR_ not modelled 6.7 15 PDB header:hydrolase Chain: R: PDB Molecule:thiocyanate hydrolase subunit gamma; PDBTitle: recombinant thiocyanate hydrolase comprising partially-modified cobalt2 centers 72 c3u62A_ not modelled 6.7 29 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima 73 d2d28c1 not modelled 6.6 28 Fold:Alpha-lytic protease prodomain-like Superfamily:EspE N-terminal domain-like Family:GSPII protein E N-terminal domain-like 74 d1nyta2 not modelled 6.6 14 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 75 c3pmoA_ not modelled 6.6 9 PDB header:transferase Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; PDBTitle: the structure of lpxd from pseudomonas aeruginosa at 1.3 a resolution 76 c2nloA_ not modelled 6.4 29 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum 77 c1p74B_ not modelled 6.4 13 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae 78 d1u5ta1 not modelled 6.3 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 79 c2w6aB_ not modelled 6.3 17 PDB header:signaling protein Chain: B: PDB Molecule:arf gtpase-activating protein git1; PDBTitle: x-ray structure of the dimeric git1 coiled-coil domain 80 c3tozA_ not modelled 6.3 27 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. 81 c2eggA_ not modelled 6.3 29 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus 82 d2dy1a3 not modelled 6.3 22 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 83 c1ahuB_ not modelled 6.1 21 PDB header:flavoenzyme Chain: B: PDB Molecule:vanillyl-alcohol oxidase; PDBTitle: structure of the octameric flavoenzyme vanillyl-alcohol2 oxidase in complex with p-cresol 84 c2dinA_ not modelled 6.1 40 PDB header:dna binding protein Chain: A: PDB Molecule:cell division cycle 5-like protein; PDBTitle: solution structure of the myb_dna-binding domain of human2 cell division cycle 5-like protein 85 d2uubc1 not modelled 6.1 33 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 86 c2hk8B_ not modelled 6.0 13 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution 87 d1ugpa_ not modelled 6.0 38 Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain 88 d1g3pa2 not modelled 6.0 20 Fold:N-terminal domains of the minor coat protein g3p Superfamily:N-terminal domains of the minor coat protein g3p Family:N-terminal domains of the minor coat protein g3p 89 c3pgjB_ not modelled 5.9 13 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate 90 d2nr7a1 not modelled 5.9 23 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:NMB1012-like 91 c2hinA_ not modelled 5.8 25 PDB header:transcription Chain: A: PDB Molecule:repressor protein; PDBTitle: structure of n15 cro at 1.05 a: an ortholog of lambda cro2 with a completely different but equally effective3 dimerization mechanism 92 d2bv3a3 not modelled 5.7 25 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 93 c3iymA_ not modelled 5.7 13 PDB header:virus Chain: A: PDB Molecule:capsid protein; PDBTitle: backbone trace of the capsid protein dimer of a fungal partitivirus2 from electron cryomicroscopy and homology modeling 94 c2fgyA_ not modelled 5.6 15 PDB header:lyase Chain: A: PDB Molecule:carboxysome shell polypeptide; PDBTitle: beta carbonic anhydrase from the carboxysomal shell of2 halothiobacillus neapolitanus (csosca) 95 c2zmeA_ not modelled 5.6 17 PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex 96 c1x5bA_ not modelled 5.5 56 PDB header:protein binding Chain: A: PDB Molecule:signal transducing adaptor molecule 2; PDBTitle: the solution structure of the vhs domain of human signal2 transducing adaptor molecule 2 97 c1npyA_ not modelled 5.5 43 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 98 c2kheA_ not modelled 5.4 19 PDB header:hydrolase Chain: A: PDB Molecule:toxin-like protein; PDBTitle: solution structure of the bacterial toxin rele from thermus2 thermophilus hb8 99 c3hzsA_ not modelled 5.3 11 PDB header:transferase Chain: A: PDB Molecule:monofunctional glycosyltransferase; PDBTitle: s. aureus monofunctional glycosyltransferase (mtga)in complex with2 moenomycin